Cargando…

COVID-Net CXR-S: Deep Convolutional Neural Network for Severity Assessment of COVID-19 Cases from Chest X-ray Images

The world is still struggling in controlling and containing the spread of the COVID-19 pandemic caused by the SARS-CoV-2 virus. The medical conditions associated with SARS-CoV-2 infections have resulted in a surge in the number of patients at clinics and hospitals, leading to a significantly increas...

Descripción completa

Detalles Bibliográficos
Autores principales: Aboutalebi, Hossein, Pavlova, Maya, Shafiee, Mohammad Javad, Sabri, Ali, Alaref, Amer, Wong, Alexander
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8774375/
https://www.ncbi.nlm.nih.gov/pubmed/35054194
http://dx.doi.org/10.3390/diagnostics12010025
_version_ 1784636326841155584
author Aboutalebi, Hossein
Pavlova, Maya
Shafiee, Mohammad Javad
Sabri, Ali
Alaref, Amer
Wong, Alexander
author_facet Aboutalebi, Hossein
Pavlova, Maya
Shafiee, Mohammad Javad
Sabri, Ali
Alaref, Amer
Wong, Alexander
author_sort Aboutalebi, Hossein
collection PubMed
description The world is still struggling in controlling and containing the spread of the COVID-19 pandemic caused by the SARS-CoV-2 virus. The medical conditions associated with SARS-CoV-2 infections have resulted in a surge in the number of patients at clinics and hospitals, leading to a significantly increased strain on healthcare resources. As such, an important part of managing and handling patients with SARS-CoV-2 infections within the clinical workflow is severity assessment, which is often conducted with the use of chest X-ray (CXR) images. In this work, we introduce COVID-Net CXR-S, a convolutional neural network for predicting the airspace severity of a SARS-CoV-2 positive patient based on a CXR image of the patient’s chest. More specifically, we leveraged transfer learning to transfer representational knowledge gained from over 16,000 CXR images from a multinational cohort of over 15,000 SARS-CoV-2 positive and negative patient cases into a custom network architecture for severity assessment. Experimental results using the RSNA RICORD dataset showed that the proposed COVID-Net CXR-S has potential to be a powerful tool for computer-aided severity assessment of CXR images of COVID-19 positive patients. Furthermore, radiologist validation on select cases by two board-certified radiologists with over 10 and 19 years of experience, respectively, showed consistency between radiologist interpretation and critical factors leveraged by COVID-Net CXR-S for severity assessment. While not a production-ready solution, the ultimate goal for the open source release of COVID-Net CXR-S is to act as a catalyst for clinical scientists, machine learning researchers, as well as citizen scientists to develop innovative new clinical decision support solutions for helping clinicians around the world manage the continuing pandemic.
format Online
Article
Text
id pubmed-8774375
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-87743752022-01-21 COVID-Net CXR-S: Deep Convolutional Neural Network for Severity Assessment of COVID-19 Cases from Chest X-ray Images Aboutalebi, Hossein Pavlova, Maya Shafiee, Mohammad Javad Sabri, Ali Alaref, Amer Wong, Alexander Diagnostics (Basel) Article The world is still struggling in controlling and containing the spread of the COVID-19 pandemic caused by the SARS-CoV-2 virus. The medical conditions associated with SARS-CoV-2 infections have resulted in a surge in the number of patients at clinics and hospitals, leading to a significantly increased strain on healthcare resources. As such, an important part of managing and handling patients with SARS-CoV-2 infections within the clinical workflow is severity assessment, which is often conducted with the use of chest X-ray (CXR) images. In this work, we introduce COVID-Net CXR-S, a convolutional neural network for predicting the airspace severity of a SARS-CoV-2 positive patient based on a CXR image of the patient’s chest. More specifically, we leveraged transfer learning to transfer representational knowledge gained from over 16,000 CXR images from a multinational cohort of over 15,000 SARS-CoV-2 positive and negative patient cases into a custom network architecture for severity assessment. Experimental results using the RSNA RICORD dataset showed that the proposed COVID-Net CXR-S has potential to be a powerful tool for computer-aided severity assessment of CXR images of COVID-19 positive patients. Furthermore, radiologist validation on select cases by two board-certified radiologists with over 10 and 19 years of experience, respectively, showed consistency between radiologist interpretation and critical factors leveraged by COVID-Net CXR-S for severity assessment. While not a production-ready solution, the ultimate goal for the open source release of COVID-Net CXR-S is to act as a catalyst for clinical scientists, machine learning researchers, as well as citizen scientists to develop innovative new clinical decision support solutions for helping clinicians around the world manage the continuing pandemic. MDPI 2021-12-23 /pmc/articles/PMC8774375/ /pubmed/35054194 http://dx.doi.org/10.3390/diagnostics12010025 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Aboutalebi, Hossein
Pavlova, Maya
Shafiee, Mohammad Javad
Sabri, Ali
Alaref, Amer
Wong, Alexander
COVID-Net CXR-S: Deep Convolutional Neural Network for Severity Assessment of COVID-19 Cases from Chest X-ray Images
title COVID-Net CXR-S: Deep Convolutional Neural Network for Severity Assessment of COVID-19 Cases from Chest X-ray Images
title_full COVID-Net CXR-S: Deep Convolutional Neural Network for Severity Assessment of COVID-19 Cases from Chest X-ray Images
title_fullStr COVID-Net CXR-S: Deep Convolutional Neural Network for Severity Assessment of COVID-19 Cases from Chest X-ray Images
title_full_unstemmed COVID-Net CXR-S: Deep Convolutional Neural Network for Severity Assessment of COVID-19 Cases from Chest X-ray Images
title_short COVID-Net CXR-S: Deep Convolutional Neural Network for Severity Assessment of COVID-19 Cases from Chest X-ray Images
title_sort covid-net cxr-s: deep convolutional neural network for severity assessment of covid-19 cases from chest x-ray images
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8774375/
https://www.ncbi.nlm.nih.gov/pubmed/35054194
http://dx.doi.org/10.3390/diagnostics12010025
work_keys_str_mv AT aboutalebihossein covidnetcxrsdeepconvolutionalneuralnetworkforseverityassessmentofcovid19casesfromchestxrayimages
AT pavlovamaya covidnetcxrsdeepconvolutionalneuralnetworkforseverityassessmentofcovid19casesfromchestxrayimages
AT shafieemohammadjavad covidnetcxrsdeepconvolutionalneuralnetworkforseverityassessmentofcovid19casesfromchestxrayimages
AT sabriali covidnetcxrsdeepconvolutionalneuralnetworkforseverityassessmentofcovid19casesfromchestxrayimages
AT alarefamer covidnetcxrsdeepconvolutionalneuralnetworkforseverityassessmentofcovid19casesfromchestxrayimages
AT wongalexander covidnetcxrsdeepconvolutionalneuralnetworkforseverityassessmentofcovid19casesfromchestxrayimages