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Precision Medicine through Next-Generation Sequencing in Inherited Eye Diseases in a Korean Cohort

In this study, we investigated medically or surgically actionable genes in inherited eye disease, based on clinical phenotype and genomic data. This retrospective consecutive case series included 149 patients with inherited eye diseases, seen by a single pediatric ophthalmologist, who underwent gene...

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Autores principales: Moon, Dabin, Park, Hye Won, Surl, Dongheon, Won, Dongju, Lee, Seung-Tae, Shin, Saeam, Choi, Jong Rak, Han, Jinu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8774510/
https://www.ncbi.nlm.nih.gov/pubmed/35052368
http://dx.doi.org/10.3390/genes13010027
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author Moon, Dabin
Park, Hye Won
Surl, Dongheon
Won, Dongju
Lee, Seung-Tae
Shin, Saeam
Choi, Jong Rak
Han, Jinu
author_facet Moon, Dabin
Park, Hye Won
Surl, Dongheon
Won, Dongju
Lee, Seung-Tae
Shin, Saeam
Choi, Jong Rak
Han, Jinu
author_sort Moon, Dabin
collection PubMed
description In this study, we investigated medically or surgically actionable genes in inherited eye disease, based on clinical phenotype and genomic data. This retrospective consecutive case series included 149 patients with inherited eye diseases, seen by a single pediatric ophthalmologist, who underwent genetic testing between 1 March 2017 and 28 February 2018. Variants were detected using a target enrichment panel of 429 genes and known deep intronic variants associated with inherited eye disease. Among 149 patients, 38 (25.5%) had a family history, and this cohort includes heterogeneous phenotype including anterior segment dysgenesis, congenital cataract, infantile nystagmus syndrome, optic atrophy, and retinal dystrophy. Overall, 90 patients (60.4%) received a definite molecular diagnosis. Overall, NGS-guided precision care was provided to 8 patients (5.4%). The precision care included cryotherapy to prevent retinal detachment in COL2A1 Stickler syndrome, osteoporosis management in patients with LRP5-associated familial exudative vitreoretinopathy, and avoidance of unnecessary phlebotomy in hyperferritinemia-cataract syndrome. A revision of the initial clinical diagnosis was made in 22 patients (14.8%). Unexpected multi-gene deletions and dual diagnosis were noted in 4 patients (2.7%). We found that precision medical or surgical managements were provided for 8 of 149 patients (5.4%), and multiple locus variants were found in 2.7% of cases. These findings are important because individualized management of inherited eye diseases can be achieved through genetic testing.
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spelling pubmed-87745102022-01-21 Precision Medicine through Next-Generation Sequencing in Inherited Eye Diseases in a Korean Cohort Moon, Dabin Park, Hye Won Surl, Dongheon Won, Dongju Lee, Seung-Tae Shin, Saeam Choi, Jong Rak Han, Jinu Genes (Basel) Article In this study, we investigated medically or surgically actionable genes in inherited eye disease, based on clinical phenotype and genomic data. This retrospective consecutive case series included 149 patients with inherited eye diseases, seen by a single pediatric ophthalmologist, who underwent genetic testing between 1 March 2017 and 28 February 2018. Variants were detected using a target enrichment panel of 429 genes and known deep intronic variants associated with inherited eye disease. Among 149 patients, 38 (25.5%) had a family history, and this cohort includes heterogeneous phenotype including anterior segment dysgenesis, congenital cataract, infantile nystagmus syndrome, optic atrophy, and retinal dystrophy. Overall, 90 patients (60.4%) received a definite molecular diagnosis. Overall, NGS-guided precision care was provided to 8 patients (5.4%). The precision care included cryotherapy to prevent retinal detachment in COL2A1 Stickler syndrome, osteoporosis management in patients with LRP5-associated familial exudative vitreoretinopathy, and avoidance of unnecessary phlebotomy in hyperferritinemia-cataract syndrome. A revision of the initial clinical diagnosis was made in 22 patients (14.8%). Unexpected multi-gene deletions and dual diagnosis were noted in 4 patients (2.7%). We found that precision medical or surgical managements were provided for 8 of 149 patients (5.4%), and multiple locus variants were found in 2.7% of cases. These findings are important because individualized management of inherited eye diseases can be achieved through genetic testing. MDPI 2021-12-23 /pmc/articles/PMC8774510/ /pubmed/35052368 http://dx.doi.org/10.3390/genes13010027 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Moon, Dabin
Park, Hye Won
Surl, Dongheon
Won, Dongju
Lee, Seung-Tae
Shin, Saeam
Choi, Jong Rak
Han, Jinu
Precision Medicine through Next-Generation Sequencing in Inherited Eye Diseases in a Korean Cohort
title Precision Medicine through Next-Generation Sequencing in Inherited Eye Diseases in a Korean Cohort
title_full Precision Medicine through Next-Generation Sequencing in Inherited Eye Diseases in a Korean Cohort
title_fullStr Precision Medicine through Next-Generation Sequencing in Inherited Eye Diseases in a Korean Cohort
title_full_unstemmed Precision Medicine through Next-Generation Sequencing in Inherited Eye Diseases in a Korean Cohort
title_short Precision Medicine through Next-Generation Sequencing in Inherited Eye Diseases in a Korean Cohort
title_sort precision medicine through next-generation sequencing in inherited eye diseases in a korean cohort
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8774510/
https://www.ncbi.nlm.nih.gov/pubmed/35052368
http://dx.doi.org/10.3390/genes13010027
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