Cargando…

Differential Analysis of A-to-I mRNA Edited Sites in Parkinson’s Disease

Parkinson’s disease (PD) is a widespread neuronal degenerative disorder with unexplored etiology. It is associated with various pathological events. In particular, the prefrontal cortex Brodmann area 9 (BA9) region is affected in PD. This frontal lobe brain region plays an important role in cognitiv...

Descripción completa

Detalles Bibliográficos
Autores principales: Pozdyshev, Denis V., Zharikova, Anastasia A., Medvedeva, Maria V., Muronetz, Vladimir I.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8774971/
https://www.ncbi.nlm.nih.gov/pubmed/35052353
http://dx.doi.org/10.3390/genes13010014
_version_ 1784636469357314048
author Pozdyshev, Denis V.
Zharikova, Anastasia A.
Medvedeva, Maria V.
Muronetz, Vladimir I.
author_facet Pozdyshev, Denis V.
Zharikova, Anastasia A.
Medvedeva, Maria V.
Muronetz, Vladimir I.
author_sort Pozdyshev, Denis V.
collection PubMed
description Parkinson’s disease (PD) is a widespread neuronal degenerative disorder with unexplored etiology. It is associated with various pathological events. In particular, the prefrontal cortex Brodmann area 9 (BA9) region is affected in PD. This frontal lobe brain region plays an important role in cognitive, motor, and memory-related functions. BA9 develops Lewy bodies in PD patients and shows essential changes in transcriptome and proteome, connected with mitochondria related pathways, protein folding pathways, and metallothioneins. Recently, altered adenosine to inosine mRNA editing patterns have been detected in various neurological pathologies. In this article, we present an investigation of differences in A-to-I RNA editing levels and specificity of mRNA editing sites in brain tissues of healthy and PD patients based on RNA sequencing data. Overall, decreased editing levels in the brains of PD patients were observed, potential editing sites with altered editing during PD were identified, and the role of different adenosine deaminases in this process was analyzed.
format Online
Article
Text
id pubmed-8774971
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-87749712022-01-21 Differential Analysis of A-to-I mRNA Edited Sites in Parkinson’s Disease Pozdyshev, Denis V. Zharikova, Anastasia A. Medvedeva, Maria V. Muronetz, Vladimir I. Genes (Basel) Communication Parkinson’s disease (PD) is a widespread neuronal degenerative disorder with unexplored etiology. It is associated with various pathological events. In particular, the prefrontal cortex Brodmann area 9 (BA9) region is affected in PD. This frontal lobe brain region plays an important role in cognitive, motor, and memory-related functions. BA9 develops Lewy bodies in PD patients and shows essential changes in transcriptome and proteome, connected with mitochondria related pathways, protein folding pathways, and metallothioneins. Recently, altered adenosine to inosine mRNA editing patterns have been detected in various neurological pathologies. In this article, we present an investigation of differences in A-to-I RNA editing levels and specificity of mRNA editing sites in brain tissues of healthy and PD patients based on RNA sequencing data. Overall, decreased editing levels in the brains of PD patients were observed, potential editing sites with altered editing during PD were identified, and the role of different adenosine deaminases in this process was analyzed. MDPI 2021-12-22 /pmc/articles/PMC8774971/ /pubmed/35052353 http://dx.doi.org/10.3390/genes13010014 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Communication
Pozdyshev, Denis V.
Zharikova, Anastasia A.
Medvedeva, Maria V.
Muronetz, Vladimir I.
Differential Analysis of A-to-I mRNA Edited Sites in Parkinson’s Disease
title Differential Analysis of A-to-I mRNA Edited Sites in Parkinson’s Disease
title_full Differential Analysis of A-to-I mRNA Edited Sites in Parkinson’s Disease
title_fullStr Differential Analysis of A-to-I mRNA Edited Sites in Parkinson’s Disease
title_full_unstemmed Differential Analysis of A-to-I mRNA Edited Sites in Parkinson’s Disease
title_short Differential Analysis of A-to-I mRNA Edited Sites in Parkinson’s Disease
title_sort differential analysis of a-to-i mrna edited sites in parkinson’s disease
topic Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8774971/
https://www.ncbi.nlm.nih.gov/pubmed/35052353
http://dx.doi.org/10.3390/genes13010014
work_keys_str_mv AT pozdyshevdenisv differentialanalysisofatoimrnaeditedsitesinparkinsonsdisease
AT zharikovaanastasiaa differentialanalysisofatoimrnaeditedsitesinparkinsonsdisease
AT medvedevamariav differentialanalysisofatoimrnaeditedsitesinparkinsonsdisease
AT muronetzvladimiri differentialanalysisofatoimrnaeditedsitesinparkinsonsdisease