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Reconstruction of the Transmission Chain of COVID-19 Outbreak in Beijing's Xinfadi Market, China

OBJECTIVES: The aim of the study was to reconstruct the complete transmission chain of the COVID-19 outbreak in Beijing's Xinfadi Market using data from epidemiological investigations, which contributes to reflecting transmission dynamics and transmission risk factors. METHODS: We set up a tran...

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Autores principales: Luo, Tianyi, Wang, Jiaojiao, Wang, Quanyi, Wang, Xiaoli, Zhao, Pengfei, Zeng, Daniel Dajun, Zhang, Qingpeng, Cao, Zhidong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Authors. Published by Elsevier Ltd on behalf of International Society for Infectious Diseases. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8776627/
https://www.ncbi.nlm.nih.gov/pubmed/35074519
http://dx.doi.org/10.1016/j.ijid.2022.01.035
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author Luo, Tianyi
Wang, Jiaojiao
Wang, Quanyi
Wang, Xiaoli
Zhao, Pengfei
Zeng, Daniel Dajun
Zhang, Qingpeng
Cao, Zhidong
author_facet Luo, Tianyi
Wang, Jiaojiao
Wang, Quanyi
Wang, Xiaoli
Zhao, Pengfei
Zeng, Daniel Dajun
Zhang, Qingpeng
Cao, Zhidong
author_sort Luo, Tianyi
collection PubMed
description OBJECTIVES: The aim of the study was to reconstruct the complete transmission chain of the COVID-19 outbreak in Beijing's Xinfadi Market using data from epidemiological investigations, which contributes to reflecting transmission dynamics and transmission risk factors. METHODS: We set up a transmission model, and the model parameters are estimated from the survey data via Markov chain Monte Carlo sampling. Bayesian data augmentation approaches are used to account for uncertainty in the source of infection, unobserved onset, and infection dates. RESULTS: The rate of transmission of COVID-19 within households is 9.2%. Older people are more susceptible to infection. The accuracy of our reconstructed transmission chain was 67.26%. In the gathering place of this outbreak, the Beef and Mutton Trading Hall of Xinfadi market, most of the transmission occurs within 20 m, only 19.61% of the transmission occurs over a wider area (>20 m), with an overall average transmission distance of 13.00 m. The deepest transmission generation is 9. In this outbreak, there were 2 abnormally high transmission events. CONCLUSIONS: The statistical method of reconstruction of transmission trees from incomplete epidemic data provides a valuable tool to help understand the complex transmission factors and provides a practical guideline for investigating the characteristics of the development of epidemics and the formulation of control measures.
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spelling pubmed-87766272022-01-21 Reconstruction of the Transmission Chain of COVID-19 Outbreak in Beijing's Xinfadi Market, China Luo, Tianyi Wang, Jiaojiao Wang, Quanyi Wang, Xiaoli Zhao, Pengfei Zeng, Daniel Dajun Zhang, Qingpeng Cao, Zhidong Int J Infect Dis Article OBJECTIVES: The aim of the study was to reconstruct the complete transmission chain of the COVID-19 outbreak in Beijing's Xinfadi Market using data from epidemiological investigations, which contributes to reflecting transmission dynamics and transmission risk factors. METHODS: We set up a transmission model, and the model parameters are estimated from the survey data via Markov chain Monte Carlo sampling. Bayesian data augmentation approaches are used to account for uncertainty in the source of infection, unobserved onset, and infection dates. RESULTS: The rate of transmission of COVID-19 within households is 9.2%. Older people are more susceptible to infection. The accuracy of our reconstructed transmission chain was 67.26%. In the gathering place of this outbreak, the Beef and Mutton Trading Hall of Xinfadi market, most of the transmission occurs within 20 m, only 19.61% of the transmission occurs over a wider area (>20 m), with an overall average transmission distance of 13.00 m. The deepest transmission generation is 9. In this outbreak, there were 2 abnormally high transmission events. CONCLUSIONS: The statistical method of reconstruction of transmission trees from incomplete epidemic data provides a valuable tool to help understand the complex transmission factors and provides a practical guideline for investigating the characteristics of the development of epidemics and the formulation of control measures. The Authors. Published by Elsevier Ltd on behalf of International Society for Infectious Diseases. 2022-03 2022-01-21 /pmc/articles/PMC8776627/ /pubmed/35074519 http://dx.doi.org/10.1016/j.ijid.2022.01.035 Text en © 2022 The Authors Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Luo, Tianyi
Wang, Jiaojiao
Wang, Quanyi
Wang, Xiaoli
Zhao, Pengfei
Zeng, Daniel Dajun
Zhang, Qingpeng
Cao, Zhidong
Reconstruction of the Transmission Chain of COVID-19 Outbreak in Beijing's Xinfadi Market, China
title Reconstruction of the Transmission Chain of COVID-19 Outbreak in Beijing's Xinfadi Market, China
title_full Reconstruction of the Transmission Chain of COVID-19 Outbreak in Beijing's Xinfadi Market, China
title_fullStr Reconstruction of the Transmission Chain of COVID-19 Outbreak in Beijing's Xinfadi Market, China
title_full_unstemmed Reconstruction of the Transmission Chain of COVID-19 Outbreak in Beijing's Xinfadi Market, China
title_short Reconstruction of the Transmission Chain of COVID-19 Outbreak in Beijing's Xinfadi Market, China
title_sort reconstruction of the transmission chain of covid-19 outbreak in beijing's xinfadi market, china
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8776627/
https://www.ncbi.nlm.nih.gov/pubmed/35074519
http://dx.doi.org/10.1016/j.ijid.2022.01.035
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