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Multilevel and Quasi Monte Carlo Methods for the Calculation of the Expected Value of Partial Perfect Information

The expected value of partial perfect information (EVPPI) provides an upper bound on the value of collecting further evidence on a set of inputs to a cost-effectiveness decision model. Standard Monte Carlo estimation of EVPPI is computationally expensive as it requires nested simulation. Alternative...

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Autores principales: Fang, Wei, Wang, Zhenru, Giles, Michael B., Jackson, Chris H., Welton, Nicky J., Andrieu, Christophe, Thom, Howard
Formato: Online Artículo Texto
Lenguaje:English
Publicado: SAGE Publications 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8777326/
https://www.ncbi.nlm.nih.gov/pubmed/34231446
http://dx.doi.org/10.1177/0272989X211026305
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author Fang, Wei
Wang, Zhenru
Giles, Michael B.
Jackson, Chris H.
Welton, Nicky J.
Andrieu, Christophe
Thom, Howard
author_facet Fang, Wei
Wang, Zhenru
Giles, Michael B.
Jackson, Chris H.
Welton, Nicky J.
Andrieu, Christophe
Thom, Howard
author_sort Fang, Wei
collection PubMed
description The expected value of partial perfect information (EVPPI) provides an upper bound on the value of collecting further evidence on a set of inputs to a cost-effectiveness decision model. Standard Monte Carlo estimation of EVPPI is computationally expensive as it requires nested simulation. Alternatives based on regression approximations to the model have been developed but are not practicable when the number of uncertain parameters of interest is large and when parameter estimates are highly correlated. The error associated with the regression approximation is difficult to determine, while MC allows the bias and precision to be controlled. In this article, we explore the potential of quasi Monte Carlo (QMC) and multilevel Monte Carlo (MLMC) estimation to reduce the computational cost of estimating EVPPI by reducing the variance compared with MC while preserving accuracy. We also develop methods to apply QMC and MLMC to EVPPI, addressing particular challenges that arise where Markov chain Monte Carlo (MCMC) has been used to estimate input parameter distributions. We illustrate the methods using 2 examples: a simplified decision tree model for treatments for depression and a complex Markov model for treatments to prevent stroke in atrial fibrillation, both of which use MCMC inputs. We compare the performance of QMC and MLMC with MC and the approximation techniques of generalized additive model (GAM) regression, Gaussian process (GP) regression, and integrated nested Laplace approximations (INLA-GP). We found QMC and MLMC to offer substantial computational savings when parameter sets are large and correlated and when the EVPPI is large. We also found that GP and INLA-GP were biased in those situations, whereas GAM cannot estimate EVPPI for large parameter sets.
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spelling pubmed-87773262022-01-22 Multilevel and Quasi Monte Carlo Methods for the Calculation of the Expected Value of Partial Perfect Information Fang, Wei Wang, Zhenru Giles, Michael B. Jackson, Chris H. Welton, Nicky J. Andrieu, Christophe Thom, Howard Med Decis Making Original Research Articles The expected value of partial perfect information (EVPPI) provides an upper bound on the value of collecting further evidence on a set of inputs to a cost-effectiveness decision model. Standard Monte Carlo estimation of EVPPI is computationally expensive as it requires nested simulation. Alternatives based on regression approximations to the model have been developed but are not practicable when the number of uncertain parameters of interest is large and when parameter estimates are highly correlated. The error associated with the regression approximation is difficult to determine, while MC allows the bias and precision to be controlled. In this article, we explore the potential of quasi Monte Carlo (QMC) and multilevel Monte Carlo (MLMC) estimation to reduce the computational cost of estimating EVPPI by reducing the variance compared with MC while preserving accuracy. We also develop methods to apply QMC and MLMC to EVPPI, addressing particular challenges that arise where Markov chain Monte Carlo (MCMC) has been used to estimate input parameter distributions. We illustrate the methods using 2 examples: a simplified decision tree model for treatments for depression and a complex Markov model for treatments to prevent stroke in atrial fibrillation, both of which use MCMC inputs. We compare the performance of QMC and MLMC with MC and the approximation techniques of generalized additive model (GAM) regression, Gaussian process (GP) regression, and integrated nested Laplace approximations (INLA-GP). We found QMC and MLMC to offer substantial computational savings when parameter sets are large and correlated and when the EVPPI is large. We also found that GP and INLA-GP were biased in those situations, whereas GAM cannot estimate EVPPI for large parameter sets. SAGE Publications 2021-07-07 2022-02 /pmc/articles/PMC8777326/ /pubmed/34231446 http://dx.doi.org/10.1177/0272989X211026305 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution 4.0 License (https://creativecommons.org/licenses/by/4.0/) which permits any use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage).
spellingShingle Original Research Articles
Fang, Wei
Wang, Zhenru
Giles, Michael B.
Jackson, Chris H.
Welton, Nicky J.
Andrieu, Christophe
Thom, Howard
Multilevel and Quasi Monte Carlo Methods for the Calculation of the Expected Value of Partial Perfect Information
title Multilevel and Quasi Monte Carlo Methods for the Calculation of the Expected Value of Partial Perfect Information
title_full Multilevel and Quasi Monte Carlo Methods for the Calculation of the Expected Value of Partial Perfect Information
title_fullStr Multilevel and Quasi Monte Carlo Methods for the Calculation of the Expected Value of Partial Perfect Information
title_full_unstemmed Multilevel and Quasi Monte Carlo Methods for the Calculation of the Expected Value of Partial Perfect Information
title_short Multilevel and Quasi Monte Carlo Methods for the Calculation of the Expected Value of Partial Perfect Information
title_sort multilevel and quasi monte carlo methods for the calculation of the expected value of partial perfect information
topic Original Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8777326/
https://www.ncbi.nlm.nih.gov/pubmed/34231446
http://dx.doi.org/10.1177/0272989X211026305
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