Cargando…
FAM65A as a novel prognostic biomarker in human tumors reveal by a pan-cancer analysis
BACKGROUND: Family with sequence similarity 65 member A (FAM65A), also known as RIPOR1, is differentially expressed between human tumor and non-tumor tissues in kinds of cancers. In addition, it was reported that the product of FAM65A may be a biomarker for cholangiocarcinoma patients. However, ther...
Autores principales: | , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer US
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8777545/ https://www.ncbi.nlm.nih.gov/pubmed/35201499 http://dx.doi.org/10.1007/s12672-021-00456-z |
_version_ | 1784637091819290624 |
---|---|
author | Liang, Wenken Mo, Chune Wei, Jianfen Chen, Wei Gong, Weiwei Shi, Jianling Hou, Xianliang Li, Chunhong Deng, Yecheng Ou, Minglin |
author_facet | Liang, Wenken Mo, Chune Wei, Jianfen Chen, Wei Gong, Weiwei Shi, Jianling Hou, Xianliang Li, Chunhong Deng, Yecheng Ou, Minglin |
author_sort | Liang, Wenken |
collection | PubMed |
description | BACKGROUND: Family with sequence similarity 65 member A (FAM65A), also known as RIPOR1, is differentially expressed between human tumor and non-tumor tissues in kinds of cancers. In addition, it was reported that the product of FAM65A may be a biomarker for cholangiocarcinoma patients. However, there is still no evidence on the relationship between the FAM65A and different types of tumors. Our study is mainly for exploring the prognostic values of FAM65A in pan-cancer and for further discovering a potential therapeutics target. METHODS: We analyzed FAM65A expression, prognostic values, genetic alteration, protein phosphorylation, immune infiltration and enrichment analysis across different types of human malignant tumors based on The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) datasets. Additionally, Real-Time PCR (RT-qPCR) was performed to further confirm the roles of FAM65A in the pathogenesis of colorectal cancer. RESULTS: We found that FAM65A expression was associated with the prognosis of multiple human tumors, especially colorectal cancer. Moreover, we also observed that FAM65A was highly expressed in colorectal cancer through RT-qPCR. We observed that decreasing phosphorylation level of the S351 locus in colon adenocarcinoma, uterine corpus endometrial carcinoma and lung adenocarcinoma. And the expression of FAM65A was positively related to cancer-associated fibroblasts (CAFs) infiltration in many tumors, such as colon adenocarcinoma. Therefore, FAM65A may be a potential prognostic biomarker of human tumors. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s12672-021-00456-z. |
format | Online Article Text |
id | pubmed-8777545 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Springer US |
record_format | MEDLINE/PubMed |
spelling | pubmed-87775452022-02-03 FAM65A as a novel prognostic biomarker in human tumors reveal by a pan-cancer analysis Liang, Wenken Mo, Chune Wei, Jianfen Chen, Wei Gong, Weiwei Shi, Jianling Hou, Xianliang Li, Chunhong Deng, Yecheng Ou, Minglin Discov Oncol Research BACKGROUND: Family with sequence similarity 65 member A (FAM65A), also known as RIPOR1, is differentially expressed between human tumor and non-tumor tissues in kinds of cancers. In addition, it was reported that the product of FAM65A may be a biomarker for cholangiocarcinoma patients. However, there is still no evidence on the relationship between the FAM65A and different types of tumors. Our study is mainly for exploring the prognostic values of FAM65A in pan-cancer and for further discovering a potential therapeutics target. METHODS: We analyzed FAM65A expression, prognostic values, genetic alteration, protein phosphorylation, immune infiltration and enrichment analysis across different types of human malignant tumors based on The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) datasets. Additionally, Real-Time PCR (RT-qPCR) was performed to further confirm the roles of FAM65A in the pathogenesis of colorectal cancer. RESULTS: We found that FAM65A expression was associated with the prognosis of multiple human tumors, especially colorectal cancer. Moreover, we also observed that FAM65A was highly expressed in colorectal cancer through RT-qPCR. We observed that decreasing phosphorylation level of the S351 locus in colon adenocarcinoma, uterine corpus endometrial carcinoma and lung adenocarcinoma. And the expression of FAM65A was positively related to cancer-associated fibroblasts (CAFs) infiltration in many tumors, such as colon adenocarcinoma. Therefore, FAM65A may be a potential prognostic biomarker of human tumors. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s12672-021-00456-z. Springer US 2021-12-07 /pmc/articles/PMC8777545/ /pubmed/35201499 http://dx.doi.org/10.1007/s12672-021-00456-z Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Research Liang, Wenken Mo, Chune Wei, Jianfen Chen, Wei Gong, Weiwei Shi, Jianling Hou, Xianliang Li, Chunhong Deng, Yecheng Ou, Minglin FAM65A as a novel prognostic biomarker in human tumors reveal by a pan-cancer analysis |
title | FAM65A as a novel prognostic biomarker in human tumors reveal by a pan-cancer analysis |
title_full | FAM65A as a novel prognostic biomarker in human tumors reveal by a pan-cancer analysis |
title_fullStr | FAM65A as a novel prognostic biomarker in human tumors reveal by a pan-cancer analysis |
title_full_unstemmed | FAM65A as a novel prognostic biomarker in human tumors reveal by a pan-cancer analysis |
title_short | FAM65A as a novel prognostic biomarker in human tumors reveal by a pan-cancer analysis |
title_sort | fam65a as a novel prognostic biomarker in human tumors reveal by a pan-cancer analysis |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8777545/ https://www.ncbi.nlm.nih.gov/pubmed/35201499 http://dx.doi.org/10.1007/s12672-021-00456-z |
work_keys_str_mv | AT liangwenken fam65aasanovelprognosticbiomarkerinhumantumorsrevealbyapancanceranalysis AT mochune fam65aasanovelprognosticbiomarkerinhumantumorsrevealbyapancanceranalysis AT weijianfen fam65aasanovelprognosticbiomarkerinhumantumorsrevealbyapancanceranalysis AT chenwei fam65aasanovelprognosticbiomarkerinhumantumorsrevealbyapancanceranalysis AT gongweiwei fam65aasanovelprognosticbiomarkerinhumantumorsrevealbyapancanceranalysis AT shijianling fam65aasanovelprognosticbiomarkerinhumantumorsrevealbyapancanceranalysis AT houxianliang fam65aasanovelprognosticbiomarkerinhumantumorsrevealbyapancanceranalysis AT lichunhong fam65aasanovelprognosticbiomarkerinhumantumorsrevealbyapancanceranalysis AT dengyecheng fam65aasanovelprognosticbiomarkerinhumantumorsrevealbyapancanceranalysis AT ouminglin fam65aasanovelprognosticbiomarkerinhumantumorsrevealbyapancanceranalysis |