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A Novel Agarase, Gaa16B, Isolated from the Marine Bacterium Gilvimarinus agarilyticus JEA5, and the Moisturizing Effect of Its Partial Hydrolysis Products

We recently identified a β-agarase, Gaa16B, in the marine bacterium Gilvimarinus agarilyticus JEA5. Gaa16B, belonging to the glycoside hydrolase 16 family of β-agarases, shows less than 70.9% amino acid similarity with previously characterized agarases. Recombinant Gaa16B lacking the carbohydrate-bi...

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Autores principales: Lee, Youngdeuk, Jo, Eunyoung, Lee, Yeon-Ju, Eom, Tae-Yang, Gang, Yehui, Kang, Yoon-Hyeok, Marasinghe, Svini Dileepa, Hettiarachchi, Sachithra Amarin, Kang, Do-Hyung, Oh, Chulhong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8778308/
https://www.ncbi.nlm.nih.gov/pubmed/35049857
http://dx.doi.org/10.3390/md20010002
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author Lee, Youngdeuk
Jo, Eunyoung
Lee, Yeon-Ju
Eom, Tae-Yang
Gang, Yehui
Kang, Yoon-Hyeok
Marasinghe, Svini Dileepa
Hettiarachchi, Sachithra Amarin
Kang, Do-Hyung
Oh, Chulhong
author_facet Lee, Youngdeuk
Jo, Eunyoung
Lee, Yeon-Ju
Eom, Tae-Yang
Gang, Yehui
Kang, Yoon-Hyeok
Marasinghe, Svini Dileepa
Hettiarachchi, Sachithra Amarin
Kang, Do-Hyung
Oh, Chulhong
author_sort Lee, Youngdeuk
collection PubMed
description We recently identified a β-agarase, Gaa16B, in the marine bacterium Gilvimarinus agarilyticus JEA5. Gaa16B, belonging to the glycoside hydrolase 16 family of β-agarases, shows less than 70.9% amino acid similarity with previously characterized agarases. Recombinant Gaa16B lacking the carbohydrate-binding region (rGaa16Bc) was overexpressed in Escherichia coli and purified. Activity assays revealed the optimal temperature and pH of rGaa16Bc to be 55 °C and pH 6–7, respectively, and the protein was highly stable at 55 °C for 90 min. Additionally, rGaa16Bc activity was strongly enhanced (2.3-fold) in the presence of 2.5 mM MnCl(2). The K(m) and V(max) of rGaa16Bc for agarose were 6.4 mg/mL and 953 U/mg, respectively. Thin-layer chromatography analysis revealed that rGaa16Bc can hydrolyze agarose into neoagarotetraose and neoagarobiose. Partial hydrolysis products (PHPs) of rGaa16Bc had an average molecular weight of 88–102 kDa and exhibited > 60% hyaluronidase inhibition activity at a concentration of 1 mg/mL, whereas the completely hydrolyzed product (CHP) showed no hyaluronidase at the same concentration. The biochemical properties of Gaa16B suggest that it could be useful for producing functional neoagaro-oligosaccharides. Additionally, the PHP of rGaa16Bc may be useful in promoting its utilization, which is limited due to the gel strength of agar.
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spelling pubmed-87783082022-01-22 A Novel Agarase, Gaa16B, Isolated from the Marine Bacterium Gilvimarinus agarilyticus JEA5, and the Moisturizing Effect of Its Partial Hydrolysis Products Lee, Youngdeuk Jo, Eunyoung Lee, Yeon-Ju Eom, Tae-Yang Gang, Yehui Kang, Yoon-Hyeok Marasinghe, Svini Dileepa Hettiarachchi, Sachithra Amarin Kang, Do-Hyung Oh, Chulhong Mar Drugs Article We recently identified a β-agarase, Gaa16B, in the marine bacterium Gilvimarinus agarilyticus JEA5. Gaa16B, belonging to the glycoside hydrolase 16 family of β-agarases, shows less than 70.9% amino acid similarity with previously characterized agarases. Recombinant Gaa16B lacking the carbohydrate-binding region (rGaa16Bc) was overexpressed in Escherichia coli and purified. Activity assays revealed the optimal temperature and pH of rGaa16Bc to be 55 °C and pH 6–7, respectively, and the protein was highly stable at 55 °C for 90 min. Additionally, rGaa16Bc activity was strongly enhanced (2.3-fold) in the presence of 2.5 mM MnCl(2). The K(m) and V(max) of rGaa16Bc for agarose were 6.4 mg/mL and 953 U/mg, respectively. Thin-layer chromatography analysis revealed that rGaa16Bc can hydrolyze agarose into neoagarotetraose and neoagarobiose. Partial hydrolysis products (PHPs) of rGaa16Bc had an average molecular weight of 88–102 kDa and exhibited > 60% hyaluronidase inhibition activity at a concentration of 1 mg/mL, whereas the completely hydrolyzed product (CHP) showed no hyaluronidase at the same concentration. The biochemical properties of Gaa16B suggest that it could be useful for producing functional neoagaro-oligosaccharides. Additionally, the PHP of rGaa16Bc may be useful in promoting its utilization, which is limited due to the gel strength of agar. MDPI 2021-12-21 /pmc/articles/PMC8778308/ /pubmed/35049857 http://dx.doi.org/10.3390/md20010002 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Lee, Youngdeuk
Jo, Eunyoung
Lee, Yeon-Ju
Eom, Tae-Yang
Gang, Yehui
Kang, Yoon-Hyeok
Marasinghe, Svini Dileepa
Hettiarachchi, Sachithra Amarin
Kang, Do-Hyung
Oh, Chulhong
A Novel Agarase, Gaa16B, Isolated from the Marine Bacterium Gilvimarinus agarilyticus JEA5, and the Moisturizing Effect of Its Partial Hydrolysis Products
title A Novel Agarase, Gaa16B, Isolated from the Marine Bacterium Gilvimarinus agarilyticus JEA5, and the Moisturizing Effect of Its Partial Hydrolysis Products
title_full A Novel Agarase, Gaa16B, Isolated from the Marine Bacterium Gilvimarinus agarilyticus JEA5, and the Moisturizing Effect of Its Partial Hydrolysis Products
title_fullStr A Novel Agarase, Gaa16B, Isolated from the Marine Bacterium Gilvimarinus agarilyticus JEA5, and the Moisturizing Effect of Its Partial Hydrolysis Products
title_full_unstemmed A Novel Agarase, Gaa16B, Isolated from the Marine Bacterium Gilvimarinus agarilyticus JEA5, and the Moisturizing Effect of Its Partial Hydrolysis Products
title_short A Novel Agarase, Gaa16B, Isolated from the Marine Bacterium Gilvimarinus agarilyticus JEA5, and the Moisturizing Effect of Its Partial Hydrolysis Products
title_sort novel agarase, gaa16b, isolated from the marine bacterium gilvimarinus agarilyticus jea5, and the moisturizing effect of its partial hydrolysis products
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8778308/
https://www.ncbi.nlm.nih.gov/pubmed/35049857
http://dx.doi.org/10.3390/md20010002
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