Cargando…

Integrating Network Pharmacology and Molecular Docking to Analyse the Potential Mechanism of action of Macleaya cordata (Willd.) R. Br. in the Treatment of Bovine Hoof Disease

Based on network pharmacological analysis and molecular docking techniques, the main components of M. cordata for the treatment of bovine relevant active compounds in M. cordata were searched for through previous research bases and literature databases, and then screened to identify candidate compou...

Descripción completa

Detalles Bibliográficos
Autores principales: Dong, Zhen, Liu, Mengting, Zou, Xianglin, Sun, Wenqing, Liu, Xiubin, Zeng, Jianguo, Yang, Zihui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8779036/
https://www.ncbi.nlm.nih.gov/pubmed/35051095
http://dx.doi.org/10.3390/vetsci9010011
_version_ 1784637472521584640
author Dong, Zhen
Liu, Mengting
Zou, Xianglin
Sun, Wenqing
Liu, Xiubin
Zeng, Jianguo
Yang, Zihui
author_facet Dong, Zhen
Liu, Mengting
Zou, Xianglin
Sun, Wenqing
Liu, Xiubin
Zeng, Jianguo
Yang, Zihui
author_sort Dong, Zhen
collection PubMed
description Based on network pharmacological analysis and molecular docking techniques, the main components of M. cordata for the treatment of bovine relevant active compounds in M. cordata were searched for through previous research bases and literature databases, and then screened to identify candidate compounds based on physicochemical properties, pharmacokinetic parameters, bioavailability, and drug-like criteria. Target genes associated with hoof disease were obtained from the GeneCards database. Compound−target, compound−target−pathway−disease visualization networks, and protein−protein interaction (PPI) networks were constructed by Cytoscape. Gene ontology (GO) analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were performed in R language. Molecular docking analysis was done using AutoDockTools. The visual network analysis showed that four active compounds, sanguinarine, chelerythrine, allocryptopine and protopine, were associated with the 10 target genes/proteins (SRC, MAPK3, MTOR, ESR1, PIK3CA, BCL2L1, JAK2, GSK3B, MAPK1, and AR) obtained from the screen. The enrichment analysis indicated that the cAMP, PI3K-Akt, and ErbB signaling pathways may be key signaling pathways in network pharmacology. The molecular docking results showed that sanguinarine, chelerythrine, allocryptopine, and protopine bound well to MAPK3 and JAK2. A comprehensive bioinformatics-based network topology strategy and molecular docking study has elucidated the multi-component synergistic mechanism of action of M. cordata in the treatment of bovine hoof disease, offering the possibility of developing M. cordata as a new source of drugs for hoof disease treatment.
format Online
Article
Text
id pubmed-8779036
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-87790362022-01-22 Integrating Network Pharmacology and Molecular Docking to Analyse the Potential Mechanism of action of Macleaya cordata (Willd.) R. Br. in the Treatment of Bovine Hoof Disease Dong, Zhen Liu, Mengting Zou, Xianglin Sun, Wenqing Liu, Xiubin Zeng, Jianguo Yang, Zihui Vet Sci Article Based on network pharmacological analysis and molecular docking techniques, the main components of M. cordata for the treatment of bovine relevant active compounds in M. cordata were searched for through previous research bases and literature databases, and then screened to identify candidate compounds based on physicochemical properties, pharmacokinetic parameters, bioavailability, and drug-like criteria. Target genes associated with hoof disease were obtained from the GeneCards database. Compound−target, compound−target−pathway−disease visualization networks, and protein−protein interaction (PPI) networks were constructed by Cytoscape. Gene ontology (GO) analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were performed in R language. Molecular docking analysis was done using AutoDockTools. The visual network analysis showed that four active compounds, sanguinarine, chelerythrine, allocryptopine and protopine, were associated with the 10 target genes/proteins (SRC, MAPK3, MTOR, ESR1, PIK3CA, BCL2L1, JAK2, GSK3B, MAPK1, and AR) obtained from the screen. The enrichment analysis indicated that the cAMP, PI3K-Akt, and ErbB signaling pathways may be key signaling pathways in network pharmacology. The molecular docking results showed that sanguinarine, chelerythrine, allocryptopine, and protopine bound well to MAPK3 and JAK2. A comprehensive bioinformatics-based network topology strategy and molecular docking study has elucidated the multi-component synergistic mechanism of action of M. cordata in the treatment of bovine hoof disease, offering the possibility of developing M. cordata as a new source of drugs for hoof disease treatment. MDPI 2021-12-30 /pmc/articles/PMC8779036/ /pubmed/35051095 http://dx.doi.org/10.3390/vetsci9010011 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Dong, Zhen
Liu, Mengting
Zou, Xianglin
Sun, Wenqing
Liu, Xiubin
Zeng, Jianguo
Yang, Zihui
Integrating Network Pharmacology and Molecular Docking to Analyse the Potential Mechanism of action of Macleaya cordata (Willd.) R. Br. in the Treatment of Bovine Hoof Disease
title Integrating Network Pharmacology and Molecular Docking to Analyse the Potential Mechanism of action of Macleaya cordata (Willd.) R. Br. in the Treatment of Bovine Hoof Disease
title_full Integrating Network Pharmacology and Molecular Docking to Analyse the Potential Mechanism of action of Macleaya cordata (Willd.) R. Br. in the Treatment of Bovine Hoof Disease
title_fullStr Integrating Network Pharmacology and Molecular Docking to Analyse the Potential Mechanism of action of Macleaya cordata (Willd.) R. Br. in the Treatment of Bovine Hoof Disease
title_full_unstemmed Integrating Network Pharmacology and Molecular Docking to Analyse the Potential Mechanism of action of Macleaya cordata (Willd.) R. Br. in the Treatment of Bovine Hoof Disease
title_short Integrating Network Pharmacology and Molecular Docking to Analyse the Potential Mechanism of action of Macleaya cordata (Willd.) R. Br. in the Treatment of Bovine Hoof Disease
title_sort integrating network pharmacology and molecular docking to analyse the potential mechanism of action of macleaya cordata (willd.) r. br. in the treatment of bovine hoof disease
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8779036/
https://www.ncbi.nlm.nih.gov/pubmed/35051095
http://dx.doi.org/10.3390/vetsci9010011
work_keys_str_mv AT dongzhen integratingnetworkpharmacologyandmoleculardockingtoanalysethepotentialmechanismofactionofmacleayacordatawilldrbrinthetreatmentofbovinehoofdisease
AT liumengting integratingnetworkpharmacologyandmoleculardockingtoanalysethepotentialmechanismofactionofmacleayacordatawilldrbrinthetreatmentofbovinehoofdisease
AT zouxianglin integratingnetworkpharmacologyandmoleculardockingtoanalysethepotentialmechanismofactionofmacleayacordatawilldrbrinthetreatmentofbovinehoofdisease
AT sunwenqing integratingnetworkpharmacologyandmoleculardockingtoanalysethepotentialmechanismofactionofmacleayacordatawilldrbrinthetreatmentofbovinehoofdisease
AT liuxiubin integratingnetworkpharmacologyandmoleculardockingtoanalysethepotentialmechanismofactionofmacleayacordatawilldrbrinthetreatmentofbovinehoofdisease
AT zengjianguo integratingnetworkpharmacologyandmoleculardockingtoanalysethepotentialmechanismofactionofmacleayacordatawilldrbrinthetreatmentofbovinehoofdisease
AT yangzihui integratingnetworkpharmacologyandmoleculardockingtoanalysethepotentialmechanismofactionofmacleayacordatawilldrbrinthetreatmentofbovinehoofdisease