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First Attempt to Couple Proteomics with the AhR Reporter Gene Bioassay in Soil Pollution Monitoring and Assessment
A topsoil sample obtained from a highly industrialized area (Taranto, Italy) was tested on the DR-CALUX(®) cell line and the exposed cells processed with proteomic and bioinformatics analyses. The presence of polyhalogenated compounds in the topsoil extracts was confirmed by GC-MS/MS analysis. Prote...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8779689/ https://www.ncbi.nlm.nih.gov/pubmed/35051051 http://dx.doi.org/10.3390/toxics10010009 |
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author | Landi, Claudia Liberatori, Giulia Cotugno, Pietro Sturba, Lucrezia Vannuccini, Maria Luisa Massari, Federica Miniero, Daniela Valeria Tursi, Angelo Shaba, Enxhi Behnisch, Peter A. Carleo, Alfonso Di Giuseppe, Fabrizio Angelucci, Stefania Bini, Luca Corsi, Ilaria |
author_facet | Landi, Claudia Liberatori, Giulia Cotugno, Pietro Sturba, Lucrezia Vannuccini, Maria Luisa Massari, Federica Miniero, Daniela Valeria Tursi, Angelo Shaba, Enxhi Behnisch, Peter A. Carleo, Alfonso Di Giuseppe, Fabrizio Angelucci, Stefania Bini, Luca Corsi, Ilaria |
author_sort | Landi, Claudia |
collection | PubMed |
description | A topsoil sample obtained from a highly industrialized area (Taranto, Italy) was tested on the DR-CALUX(®) cell line and the exposed cells processed with proteomic and bioinformatics analyses. The presence of polyhalogenated compounds in the topsoil extracts was confirmed by GC-MS/MS analysis. Proteomic analysis of the cells exposed to the topsoil extracts identified 43 differential proteins. Enrichment analysis highlighted biological processes, such as the cellular response to a chemical stimulus, stress, and inorganic substances; regulation of translation; regulation of apoptotic process; and the response to organonitrogen compounds in light of particular drugs and compounds, extrapolated by bioinformatics all linked to the identified protein modifications. Our results confirm and reflect the complex epidemiological situation occurring among Taranto inhabitants and underline the need to further investigate the presence and sources of inferred chemicals in soils. The combination of bioassays and proteomics reveals a more complex scenario of chemicals able to affect cellular pathways and leading to toxicities rather than those identified by only bioassays and related chemical analysis. This combined approach turns out to be a promising tool for soil risk assessment and deserves further investigation and developments for soil monitoring and risk assessment. |
format | Online Article Text |
id | pubmed-8779689 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-87796892022-01-22 First Attempt to Couple Proteomics with the AhR Reporter Gene Bioassay in Soil Pollution Monitoring and Assessment Landi, Claudia Liberatori, Giulia Cotugno, Pietro Sturba, Lucrezia Vannuccini, Maria Luisa Massari, Federica Miniero, Daniela Valeria Tursi, Angelo Shaba, Enxhi Behnisch, Peter A. Carleo, Alfonso Di Giuseppe, Fabrizio Angelucci, Stefania Bini, Luca Corsi, Ilaria Toxics Communication A topsoil sample obtained from a highly industrialized area (Taranto, Italy) was tested on the DR-CALUX(®) cell line and the exposed cells processed with proteomic and bioinformatics analyses. The presence of polyhalogenated compounds in the topsoil extracts was confirmed by GC-MS/MS analysis. Proteomic analysis of the cells exposed to the topsoil extracts identified 43 differential proteins. Enrichment analysis highlighted biological processes, such as the cellular response to a chemical stimulus, stress, and inorganic substances; regulation of translation; regulation of apoptotic process; and the response to organonitrogen compounds in light of particular drugs and compounds, extrapolated by bioinformatics all linked to the identified protein modifications. Our results confirm and reflect the complex epidemiological situation occurring among Taranto inhabitants and underline the need to further investigate the presence and sources of inferred chemicals in soils. The combination of bioassays and proteomics reveals a more complex scenario of chemicals able to affect cellular pathways and leading to toxicities rather than those identified by only bioassays and related chemical analysis. This combined approach turns out to be a promising tool for soil risk assessment and deserves further investigation and developments for soil monitoring and risk assessment. MDPI 2021-12-29 /pmc/articles/PMC8779689/ /pubmed/35051051 http://dx.doi.org/10.3390/toxics10010009 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Communication Landi, Claudia Liberatori, Giulia Cotugno, Pietro Sturba, Lucrezia Vannuccini, Maria Luisa Massari, Federica Miniero, Daniela Valeria Tursi, Angelo Shaba, Enxhi Behnisch, Peter A. Carleo, Alfonso Di Giuseppe, Fabrizio Angelucci, Stefania Bini, Luca Corsi, Ilaria First Attempt to Couple Proteomics with the AhR Reporter Gene Bioassay in Soil Pollution Monitoring and Assessment |
title | First Attempt to Couple Proteomics with the AhR Reporter Gene Bioassay in Soil Pollution Monitoring and Assessment |
title_full | First Attempt to Couple Proteomics with the AhR Reporter Gene Bioassay in Soil Pollution Monitoring and Assessment |
title_fullStr | First Attempt to Couple Proteomics with the AhR Reporter Gene Bioassay in Soil Pollution Monitoring and Assessment |
title_full_unstemmed | First Attempt to Couple Proteomics with the AhR Reporter Gene Bioassay in Soil Pollution Monitoring and Assessment |
title_short | First Attempt to Couple Proteomics with the AhR Reporter Gene Bioassay in Soil Pollution Monitoring and Assessment |
title_sort | first attempt to couple proteomics with the ahr reporter gene bioassay in soil pollution monitoring and assessment |
topic | Communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8779689/ https://www.ncbi.nlm.nih.gov/pubmed/35051051 http://dx.doi.org/10.3390/toxics10010009 |
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