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Methyltransferase as Antibiotics Against Foodborne Pathogens: An In Silico Approach for Exploring Enzyme as Enzymobiotics

The development of resistance in microbes against antibiotics and limited choice for the use of chemical preservatives in food lead the urgent need to search for an alternative to antibiotics. The enzymes are catalytic proteins that catalyze digestion of bacterial cell walls and protein requirements...

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Autores principales: Ahmad, Varish, Ahmad, Aftab, Abuzinadah, Mohammed F., Al-Thawdi, Salwa, Yunus, Ghazala
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8780565/
https://www.ncbi.nlm.nih.gov/pubmed/35069699
http://dx.doi.org/10.3389/fgene.2021.800587
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author Ahmad, Varish
Ahmad, Aftab
Abuzinadah, Mohammed F.
Al-Thawdi, Salwa
Yunus, Ghazala
author_facet Ahmad, Varish
Ahmad, Aftab
Abuzinadah, Mohammed F.
Al-Thawdi, Salwa
Yunus, Ghazala
author_sort Ahmad, Varish
collection PubMed
description The development of resistance in microbes against antibiotics and limited choice for the use of chemical preservatives in food lead the urgent need to search for an alternative to antibiotics. The enzymes are catalytic proteins that catalyze digestion of bacterial cell walls and protein requirements for the survival of the cell. To study methyltransferase as antibiotics against foodborne pathogen, the methyltransferase enzyme sequence was modeled and its interactions were analyzed against a membrane protein of the gram-positive and gram-negative bacteria through in silico protein–protein interactions. The methyltransferase interaction with cellular protein was found to be maximum, due to the maximum PatchDock Score (15808), which was followed by colicin (12864) and amoxicillin (4122). The modeled protein has found to be interact more significantly to inhibit the indicator bacteria than the tested antibiotics and antimicrobial colicin protein. Thus, model enzyme methyltransferase could be used as enzymobiotics. Moreover, peptide sequences similar to this enzyme sequence need to be designed and evaluated against the microbial pathogen.
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spelling pubmed-87805652022-01-22 Methyltransferase as Antibiotics Against Foodborne Pathogens: An In Silico Approach for Exploring Enzyme as Enzymobiotics Ahmad, Varish Ahmad, Aftab Abuzinadah, Mohammed F. Al-Thawdi, Salwa Yunus, Ghazala Front Genet Genetics The development of resistance in microbes against antibiotics and limited choice for the use of chemical preservatives in food lead the urgent need to search for an alternative to antibiotics. The enzymes are catalytic proteins that catalyze digestion of bacterial cell walls and protein requirements for the survival of the cell. To study methyltransferase as antibiotics against foodborne pathogen, the methyltransferase enzyme sequence was modeled and its interactions were analyzed against a membrane protein of the gram-positive and gram-negative bacteria through in silico protein–protein interactions. The methyltransferase interaction with cellular protein was found to be maximum, due to the maximum PatchDock Score (15808), which was followed by colicin (12864) and amoxicillin (4122). The modeled protein has found to be interact more significantly to inhibit the indicator bacteria than the tested antibiotics and antimicrobial colicin protein. Thus, model enzyme methyltransferase could be used as enzymobiotics. Moreover, peptide sequences similar to this enzyme sequence need to be designed and evaluated against the microbial pathogen. Frontiers Media S.A. 2022-01-03 /pmc/articles/PMC8780565/ /pubmed/35069699 http://dx.doi.org/10.3389/fgene.2021.800587 Text en Copyright © 2022 Ahmad, Ahmad, Abuzinadah, Al-Thawdi and Yunus. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Ahmad, Varish
Ahmad, Aftab
Abuzinadah, Mohammed F.
Al-Thawdi, Salwa
Yunus, Ghazala
Methyltransferase as Antibiotics Against Foodborne Pathogens: An In Silico Approach for Exploring Enzyme as Enzymobiotics
title Methyltransferase as Antibiotics Against Foodborne Pathogens: An In Silico Approach for Exploring Enzyme as Enzymobiotics
title_full Methyltransferase as Antibiotics Against Foodborne Pathogens: An In Silico Approach for Exploring Enzyme as Enzymobiotics
title_fullStr Methyltransferase as Antibiotics Against Foodborne Pathogens: An In Silico Approach for Exploring Enzyme as Enzymobiotics
title_full_unstemmed Methyltransferase as Antibiotics Against Foodborne Pathogens: An In Silico Approach for Exploring Enzyme as Enzymobiotics
title_short Methyltransferase as Antibiotics Against Foodborne Pathogens: An In Silico Approach for Exploring Enzyme as Enzymobiotics
title_sort methyltransferase as antibiotics against foodborne pathogens: an in silico approach for exploring enzyme as enzymobiotics
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8780565/
https://www.ncbi.nlm.nih.gov/pubmed/35069699
http://dx.doi.org/10.3389/fgene.2021.800587
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