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Automatic Aortic Valve Cusps Segmentation from CT Images Based on the Cascading Multiple Deep Neural Networks
Accurate morphological information on aortic valve cusps is critical in treatment planning. Image segmentation is necessary to acquire this information, but manual segmentation is tedious and time consuming. In this paper, we propose a fully automatic aortic valve cusps segmentation method from CT i...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8780687/ https://www.ncbi.nlm.nih.gov/pubmed/35049852 http://dx.doi.org/10.3390/jimaging8010011 |
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author | Aoyama, Gakuto Zhao, Longfei Zhao, Shun Xue, Xiao Zhong, Yunxin Yamauchi, Haruo Tsukihara, Hiroyuki Maeda, Eriko Ino, Kenji Tomii, Naoki Takagi, Shu Sakuma, Ichiro Ono, Minoru Sakaguchi, Takuya |
author_facet | Aoyama, Gakuto Zhao, Longfei Zhao, Shun Xue, Xiao Zhong, Yunxin Yamauchi, Haruo Tsukihara, Hiroyuki Maeda, Eriko Ino, Kenji Tomii, Naoki Takagi, Shu Sakuma, Ichiro Ono, Minoru Sakaguchi, Takuya |
author_sort | Aoyama, Gakuto |
collection | PubMed |
description | Accurate morphological information on aortic valve cusps is critical in treatment planning. Image segmentation is necessary to acquire this information, but manual segmentation is tedious and time consuming. In this paper, we propose a fully automatic aortic valve cusps segmentation method from CT images by combining two deep neural networks, spatial configuration-Net for detecting anatomical landmarks and U-Net for segmentation of aortic valve components. A total of 258 CT volumes of end systolic and end diastolic phases, which include cases with and without severe calcifications, were collected and manually annotated for each aortic valve component. The collected CT volumes were split 6:2:2 for the training, validation and test steps, and our method was evaluated by five-fold cross validation. The segmentation was successful for all CT volumes with 69.26 s as mean processing time. For the segmentation results of the aortic root, the right-coronary cusp, the left-coronary cusp and the non-coronary cusp, mean Dice Coefficient were 0.95, 0.70, 0.69, and 0.67, respectively. There were strong correlations between measurement values automatically calculated based on the annotations and those based on the segmentation results. The results suggest that our method can be used to automatically obtain measurement values for aortic valve morphology. |
format | Online Article Text |
id | pubmed-8780687 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-87806872022-01-22 Automatic Aortic Valve Cusps Segmentation from CT Images Based on the Cascading Multiple Deep Neural Networks Aoyama, Gakuto Zhao, Longfei Zhao, Shun Xue, Xiao Zhong, Yunxin Yamauchi, Haruo Tsukihara, Hiroyuki Maeda, Eriko Ino, Kenji Tomii, Naoki Takagi, Shu Sakuma, Ichiro Ono, Minoru Sakaguchi, Takuya J Imaging Article Accurate morphological information on aortic valve cusps is critical in treatment planning. Image segmentation is necessary to acquire this information, but manual segmentation is tedious and time consuming. In this paper, we propose a fully automatic aortic valve cusps segmentation method from CT images by combining two deep neural networks, spatial configuration-Net for detecting anatomical landmarks and U-Net for segmentation of aortic valve components. A total of 258 CT volumes of end systolic and end diastolic phases, which include cases with and without severe calcifications, were collected and manually annotated for each aortic valve component. The collected CT volumes were split 6:2:2 for the training, validation and test steps, and our method was evaluated by five-fold cross validation. The segmentation was successful for all CT volumes with 69.26 s as mean processing time. For the segmentation results of the aortic root, the right-coronary cusp, the left-coronary cusp and the non-coronary cusp, mean Dice Coefficient were 0.95, 0.70, 0.69, and 0.67, respectively. There were strong correlations between measurement values automatically calculated based on the annotations and those based on the segmentation results. The results suggest that our method can be used to automatically obtain measurement values for aortic valve morphology. MDPI 2022-01-14 /pmc/articles/PMC8780687/ /pubmed/35049852 http://dx.doi.org/10.3390/jimaging8010011 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Aoyama, Gakuto Zhao, Longfei Zhao, Shun Xue, Xiao Zhong, Yunxin Yamauchi, Haruo Tsukihara, Hiroyuki Maeda, Eriko Ino, Kenji Tomii, Naoki Takagi, Shu Sakuma, Ichiro Ono, Minoru Sakaguchi, Takuya Automatic Aortic Valve Cusps Segmentation from CT Images Based on the Cascading Multiple Deep Neural Networks |
title | Automatic Aortic Valve Cusps Segmentation from CT Images Based on the Cascading Multiple Deep Neural Networks |
title_full | Automatic Aortic Valve Cusps Segmentation from CT Images Based on the Cascading Multiple Deep Neural Networks |
title_fullStr | Automatic Aortic Valve Cusps Segmentation from CT Images Based on the Cascading Multiple Deep Neural Networks |
title_full_unstemmed | Automatic Aortic Valve Cusps Segmentation from CT Images Based on the Cascading Multiple Deep Neural Networks |
title_short | Automatic Aortic Valve Cusps Segmentation from CT Images Based on the Cascading Multiple Deep Neural Networks |
title_sort | automatic aortic valve cusps segmentation from ct images based on the cascading multiple deep neural networks |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8780687/ https://www.ncbi.nlm.nih.gov/pubmed/35049852 http://dx.doi.org/10.3390/jimaging8010011 |
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