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How Do Roots Interact with Layered Soils?

Vegetation alters soil fabric by providing biological reinforcement and enhancing the overall mechanical behaviour of slopes, thereby controlling shallow mass movement. To predict the behaviour of vegetated slopes, parameters representing the root system structure, such as root distribution, length,...

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Detalles Bibliográficos
Autores principales: Kemp, Nina, Angelidakis, Vasileios, Luli, Saimir, Nadimi, Sadegh
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8781602/
https://www.ncbi.nlm.nih.gov/pubmed/35049846
http://dx.doi.org/10.3390/jimaging8010005
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author Kemp, Nina
Angelidakis, Vasileios
Luli, Saimir
Nadimi, Sadegh
author_facet Kemp, Nina
Angelidakis, Vasileios
Luli, Saimir
Nadimi, Sadegh
author_sort Kemp, Nina
collection PubMed
description Vegetation alters soil fabric by providing biological reinforcement and enhancing the overall mechanical behaviour of slopes, thereby controlling shallow mass movement. To predict the behaviour of vegetated slopes, parameters representing the root system structure, such as root distribution, length, orientation and diameter, should be considered in slope stability models. This study quantifies the relationship between soil physical characteristics and root growth, giving special emphasis on (1) how roots influence the physical architecture of the surrounding soil structure and (2) how soil structure influences the root growth. A systematic experimental study is carried out using high-resolution X-ray micro-computed tomography (µCT) to observe the root behaviour in layered soil. In total, 2 samples are scanned over 15 days, enabling the acquisition of 10 sets of images. A machine learning algorithm for image segmentation is trained to act at 3 different training percentages, resulting in the processing of 30 sets of images, with the outcomes prompting a discussion on the size of the training data set. An automated in-house image processing algorithm is employed to quantify the void ratio and root volume ratio. This script enables post processing and image analysis of all 30 cases within few hours. This work investigates the effect of stratigraphy on root growth, along with the effect of image-segmentation parameters on soil constitutive properties.
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spelling pubmed-87816022022-01-22 How Do Roots Interact with Layered Soils? Kemp, Nina Angelidakis, Vasileios Luli, Saimir Nadimi, Sadegh J Imaging Article Vegetation alters soil fabric by providing biological reinforcement and enhancing the overall mechanical behaviour of slopes, thereby controlling shallow mass movement. To predict the behaviour of vegetated slopes, parameters representing the root system structure, such as root distribution, length, orientation and diameter, should be considered in slope stability models. This study quantifies the relationship between soil physical characteristics and root growth, giving special emphasis on (1) how roots influence the physical architecture of the surrounding soil structure and (2) how soil structure influences the root growth. A systematic experimental study is carried out using high-resolution X-ray micro-computed tomography (µCT) to observe the root behaviour in layered soil. In total, 2 samples are scanned over 15 days, enabling the acquisition of 10 sets of images. A machine learning algorithm for image segmentation is trained to act at 3 different training percentages, resulting in the processing of 30 sets of images, with the outcomes prompting a discussion on the size of the training data set. An automated in-house image processing algorithm is employed to quantify the void ratio and root volume ratio. This script enables post processing and image analysis of all 30 cases within few hours. This work investigates the effect of stratigraphy on root growth, along with the effect of image-segmentation parameters on soil constitutive properties. MDPI 2022-01-05 /pmc/articles/PMC8781602/ /pubmed/35049846 http://dx.doi.org/10.3390/jimaging8010005 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Kemp, Nina
Angelidakis, Vasileios
Luli, Saimir
Nadimi, Sadegh
How Do Roots Interact with Layered Soils?
title How Do Roots Interact with Layered Soils?
title_full How Do Roots Interact with Layered Soils?
title_fullStr How Do Roots Interact with Layered Soils?
title_full_unstemmed How Do Roots Interact with Layered Soils?
title_short How Do Roots Interact with Layered Soils?
title_sort how do roots interact with layered soils?
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8781602/
https://www.ncbi.nlm.nih.gov/pubmed/35049846
http://dx.doi.org/10.3390/jimaging8010005
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