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Molecular Identification and Appraisal of the Genetic Variation of Taenia saginata in Central Regions of Vietnam

Taenia saginata is a globally distributed tapeworm responsible for human taeniasis due to the ingestion of raw or undercooked beef. T. saginata is present in several Asian countries, including China, Thailand, Lao PDR, Cambodia, and Vietnam, but little is known about its genetic variation. Studying...

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Autores principales: Tran Thi, Giang, Azzena, Ilenia, Scarpa, Fabio, Cossu, Piero, Danh Le, Cong, Ton Nu, Phuong Anh, Chau Ngo, Thi Minh, Sanna, Daria, Casu, Marco
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8781798/
https://www.ncbi.nlm.nih.gov/pubmed/35054461
http://dx.doi.org/10.3390/life12010070
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author Tran Thi, Giang
Azzena, Ilenia
Scarpa, Fabio
Cossu, Piero
Danh Le, Cong
Ton Nu, Phuong Anh
Chau Ngo, Thi Minh
Sanna, Daria
Casu, Marco
author_facet Tran Thi, Giang
Azzena, Ilenia
Scarpa, Fabio
Cossu, Piero
Danh Le, Cong
Ton Nu, Phuong Anh
Chau Ngo, Thi Minh
Sanna, Daria
Casu, Marco
author_sort Tran Thi, Giang
collection PubMed
description Taenia saginata is a globally distributed tapeworm responsible for human taeniasis due to the ingestion of raw or undercooked beef. T. saginata is present in several Asian countries, including China, Thailand, Lao PDR, Cambodia, and Vietnam, but little is known about its genetic variation. Studying the tapeworm’s phylogeographic patterns is crucial to better understanding their association with the geographic distribution of taeniasis/cysticercosis in human populations. In the present study, 38 specimens of this putative species were collected in central regions of Vietnam and analysed using the mitochondrial gene Cytochrome c Oxidase subunit I (COI) as a molecular marker to assess the correct species identification and investigate the level of genetic variation at different geographic scales. Phylogenetic and phylogeographic analyses were carried out on a dataset that included COI sequences from Vietnamese specimens and from all conspecifics available in GenBank to date. The results showed that the collected Vietnamese specimens belonged to the species T. saginata. In Southeast Asia, signs of a possible founder effect were discovered, with the most common haplotypes frequent and present in many countries, except Lao PDR, which shares its most common haplotype only with individuals from Thailand. Remarkably, a unique taxonomic entity was found worldwide, even though the available COI sequences of T. saginata belonging to non-Asiatic countries are, at present, limited. Therefore, future studies including more COI sequences from a higher number of countries and the use of a combined molecular approach with multiple genetic markers would be useful to provide deeper insight into the global genetic variation of this species.
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spelling pubmed-87817982022-01-22 Molecular Identification and Appraisal of the Genetic Variation of Taenia saginata in Central Regions of Vietnam Tran Thi, Giang Azzena, Ilenia Scarpa, Fabio Cossu, Piero Danh Le, Cong Ton Nu, Phuong Anh Chau Ngo, Thi Minh Sanna, Daria Casu, Marco Life (Basel) Article Taenia saginata is a globally distributed tapeworm responsible for human taeniasis due to the ingestion of raw or undercooked beef. T. saginata is present in several Asian countries, including China, Thailand, Lao PDR, Cambodia, and Vietnam, but little is known about its genetic variation. Studying the tapeworm’s phylogeographic patterns is crucial to better understanding their association with the geographic distribution of taeniasis/cysticercosis in human populations. In the present study, 38 specimens of this putative species were collected in central regions of Vietnam and analysed using the mitochondrial gene Cytochrome c Oxidase subunit I (COI) as a molecular marker to assess the correct species identification and investigate the level of genetic variation at different geographic scales. Phylogenetic and phylogeographic analyses were carried out on a dataset that included COI sequences from Vietnamese specimens and from all conspecifics available in GenBank to date. The results showed that the collected Vietnamese specimens belonged to the species T. saginata. In Southeast Asia, signs of a possible founder effect were discovered, with the most common haplotypes frequent and present in many countries, except Lao PDR, which shares its most common haplotype only with individuals from Thailand. Remarkably, a unique taxonomic entity was found worldwide, even though the available COI sequences of T. saginata belonging to non-Asiatic countries are, at present, limited. Therefore, future studies including more COI sequences from a higher number of countries and the use of a combined molecular approach with multiple genetic markers would be useful to provide deeper insight into the global genetic variation of this species. MDPI 2022-01-04 /pmc/articles/PMC8781798/ /pubmed/35054461 http://dx.doi.org/10.3390/life12010070 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Tran Thi, Giang
Azzena, Ilenia
Scarpa, Fabio
Cossu, Piero
Danh Le, Cong
Ton Nu, Phuong Anh
Chau Ngo, Thi Minh
Sanna, Daria
Casu, Marco
Molecular Identification and Appraisal of the Genetic Variation of Taenia saginata in Central Regions of Vietnam
title Molecular Identification and Appraisal of the Genetic Variation of Taenia saginata in Central Regions of Vietnam
title_full Molecular Identification and Appraisal of the Genetic Variation of Taenia saginata in Central Regions of Vietnam
title_fullStr Molecular Identification and Appraisal of the Genetic Variation of Taenia saginata in Central Regions of Vietnam
title_full_unstemmed Molecular Identification and Appraisal of the Genetic Variation of Taenia saginata in Central Regions of Vietnam
title_short Molecular Identification and Appraisal of the Genetic Variation of Taenia saginata in Central Regions of Vietnam
title_sort molecular identification and appraisal of the genetic variation of taenia saginata in central regions of vietnam
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8781798/
https://www.ncbi.nlm.nih.gov/pubmed/35054461
http://dx.doi.org/10.3390/life12010070
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