Cargando…
Molecular Identification and Appraisal of the Genetic Variation of Taenia saginata in Central Regions of Vietnam
Taenia saginata is a globally distributed tapeworm responsible for human taeniasis due to the ingestion of raw or undercooked beef. T. saginata is present in several Asian countries, including China, Thailand, Lao PDR, Cambodia, and Vietnam, but little is known about its genetic variation. Studying...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8781798/ https://www.ncbi.nlm.nih.gov/pubmed/35054461 http://dx.doi.org/10.3390/life12010070 |
_version_ | 1784638165883027456 |
---|---|
author | Tran Thi, Giang Azzena, Ilenia Scarpa, Fabio Cossu, Piero Danh Le, Cong Ton Nu, Phuong Anh Chau Ngo, Thi Minh Sanna, Daria Casu, Marco |
author_facet | Tran Thi, Giang Azzena, Ilenia Scarpa, Fabio Cossu, Piero Danh Le, Cong Ton Nu, Phuong Anh Chau Ngo, Thi Minh Sanna, Daria Casu, Marco |
author_sort | Tran Thi, Giang |
collection | PubMed |
description | Taenia saginata is a globally distributed tapeworm responsible for human taeniasis due to the ingestion of raw or undercooked beef. T. saginata is present in several Asian countries, including China, Thailand, Lao PDR, Cambodia, and Vietnam, but little is known about its genetic variation. Studying the tapeworm’s phylogeographic patterns is crucial to better understanding their association with the geographic distribution of taeniasis/cysticercosis in human populations. In the present study, 38 specimens of this putative species were collected in central regions of Vietnam and analysed using the mitochondrial gene Cytochrome c Oxidase subunit I (COI) as a molecular marker to assess the correct species identification and investigate the level of genetic variation at different geographic scales. Phylogenetic and phylogeographic analyses were carried out on a dataset that included COI sequences from Vietnamese specimens and from all conspecifics available in GenBank to date. The results showed that the collected Vietnamese specimens belonged to the species T. saginata. In Southeast Asia, signs of a possible founder effect were discovered, with the most common haplotypes frequent and present in many countries, except Lao PDR, which shares its most common haplotype only with individuals from Thailand. Remarkably, a unique taxonomic entity was found worldwide, even though the available COI sequences of T. saginata belonging to non-Asiatic countries are, at present, limited. Therefore, future studies including more COI sequences from a higher number of countries and the use of a combined molecular approach with multiple genetic markers would be useful to provide deeper insight into the global genetic variation of this species. |
format | Online Article Text |
id | pubmed-8781798 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-87817982022-01-22 Molecular Identification and Appraisal of the Genetic Variation of Taenia saginata in Central Regions of Vietnam Tran Thi, Giang Azzena, Ilenia Scarpa, Fabio Cossu, Piero Danh Le, Cong Ton Nu, Phuong Anh Chau Ngo, Thi Minh Sanna, Daria Casu, Marco Life (Basel) Article Taenia saginata is a globally distributed tapeworm responsible for human taeniasis due to the ingestion of raw or undercooked beef. T. saginata is present in several Asian countries, including China, Thailand, Lao PDR, Cambodia, and Vietnam, but little is known about its genetic variation. Studying the tapeworm’s phylogeographic patterns is crucial to better understanding their association with the geographic distribution of taeniasis/cysticercosis in human populations. In the present study, 38 specimens of this putative species were collected in central regions of Vietnam and analysed using the mitochondrial gene Cytochrome c Oxidase subunit I (COI) as a molecular marker to assess the correct species identification and investigate the level of genetic variation at different geographic scales. Phylogenetic and phylogeographic analyses were carried out on a dataset that included COI sequences from Vietnamese specimens and from all conspecifics available in GenBank to date. The results showed that the collected Vietnamese specimens belonged to the species T. saginata. In Southeast Asia, signs of a possible founder effect were discovered, with the most common haplotypes frequent and present in many countries, except Lao PDR, which shares its most common haplotype only with individuals from Thailand. Remarkably, a unique taxonomic entity was found worldwide, even though the available COI sequences of T. saginata belonging to non-Asiatic countries are, at present, limited. Therefore, future studies including more COI sequences from a higher number of countries and the use of a combined molecular approach with multiple genetic markers would be useful to provide deeper insight into the global genetic variation of this species. MDPI 2022-01-04 /pmc/articles/PMC8781798/ /pubmed/35054461 http://dx.doi.org/10.3390/life12010070 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Tran Thi, Giang Azzena, Ilenia Scarpa, Fabio Cossu, Piero Danh Le, Cong Ton Nu, Phuong Anh Chau Ngo, Thi Minh Sanna, Daria Casu, Marco Molecular Identification and Appraisal of the Genetic Variation of Taenia saginata in Central Regions of Vietnam |
title | Molecular Identification and Appraisal of the Genetic Variation of Taenia saginata in Central Regions of Vietnam |
title_full | Molecular Identification and Appraisal of the Genetic Variation of Taenia saginata in Central Regions of Vietnam |
title_fullStr | Molecular Identification and Appraisal of the Genetic Variation of Taenia saginata in Central Regions of Vietnam |
title_full_unstemmed | Molecular Identification and Appraisal of the Genetic Variation of Taenia saginata in Central Regions of Vietnam |
title_short | Molecular Identification and Appraisal of the Genetic Variation of Taenia saginata in Central Regions of Vietnam |
title_sort | molecular identification and appraisal of the genetic variation of taenia saginata in central regions of vietnam |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8781798/ https://www.ncbi.nlm.nih.gov/pubmed/35054461 http://dx.doi.org/10.3390/life12010070 |
work_keys_str_mv | AT tranthigiang molecularidentificationandappraisalofthegeneticvariationoftaeniasaginataincentralregionsofvietnam AT azzenailenia molecularidentificationandappraisalofthegeneticvariationoftaeniasaginataincentralregionsofvietnam AT scarpafabio molecularidentificationandappraisalofthegeneticvariationoftaeniasaginataincentralregionsofvietnam AT cossupiero molecularidentificationandappraisalofthegeneticvariationoftaeniasaginataincentralregionsofvietnam AT danhlecong molecularidentificationandappraisalofthegeneticvariationoftaeniasaginataincentralregionsofvietnam AT tonnuphuonganh molecularidentificationandappraisalofthegeneticvariationoftaeniasaginataincentralregionsofvietnam AT chaungothiminh molecularidentificationandappraisalofthegeneticvariationoftaeniasaginataincentralregionsofvietnam AT sannadaria molecularidentificationandappraisalofthegeneticvariationoftaeniasaginataincentralregionsofvietnam AT casumarco molecularidentificationandappraisalofthegeneticvariationoftaeniasaginataincentralregionsofvietnam |