Cargando…
DnoisE: distance denoising by entropy. An open-source parallelizable alternative for denoising sequence datasets
DNA metabarcoding is broadly used in biodiversity studies encompassing a wide range of organisms. Erroneous amplicons, generated during amplification and sequencing procedures, constitute one of the major sources of concern for the interpretation of metabarcoding results. Several denoising programs...
Autores principales: | Antich, Adrià, Palacín, Creu, Turon, Xavier, Wangensteen, Owen S. |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8783565/ https://www.ncbi.nlm.nih.gov/pubmed/35111399 http://dx.doi.org/10.7717/peerj.12758 |
Ejemplares similares
-
To denoise or to cluster, that is not the question: optimizing pipelines for COI metabarcoding and metaphylogeography
por: Antich, Adrià, et al.
Publicado: (2021) -
DNA metabarcoding of littoral hard-bottom communities: high diversity and database gaps revealed by two molecular markers
por: Wangensteen, Owen S., et al.
Publicado: (2018) -
From metabarcoding to metaphylogeography: separating the wheat from the chaff
por: Turon, Xavier, et al.
Publicado: (2019) -
Natural or Naturalized? Phylogeography Suggests That the Abundant Sea Urchin Arbacia lixula Is a Recent Colonizer of the Mediterranean
por: Wangensteen, Owen S., et al.
Publicado: (2012) -
Spatio-temporal monitoring of deep-sea communities using metabarcoding of sediment DNA and RNA
por: Guardiola, Magdalena, et al.
Publicado: (2016)