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Profile Screening of Differentially Expressed lncRNAs of Circulating Leukocytes in Type 2 Diabetes Patients and Differences From Type 1 Diabetes

Long noncoding RNAs (lncRNAs) have been reported to have multiple functions and can be used as markers of various diseases, including diabetes. This study was conducted to determine the lncRNA profile in leukocytes from patients with type 2 diabetes (T2D). Differential expression of lncRNAs in T2D a...

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Autores principales: Lv, Jianyi, Liu, Yihan, Cui, Jia, Fang, Hongjuan, Wu, Ying, Zhu, Xiao, Guo, Meng, Li, Changlong, Dou, Jingtao, Chen, Zhenwen, Du, Xiaoyan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8786112/
https://www.ncbi.nlm.nih.gov/pubmed/35082751
http://dx.doi.org/10.3389/fendo.2021.690555
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author Lv, Jianyi
Liu, Yihan
Cui, Jia
Fang, Hongjuan
Wu, Ying
Zhu, Xiao
Guo, Meng
Li, Changlong
Dou, Jingtao
Chen, Zhenwen
Du, Xiaoyan
author_facet Lv, Jianyi
Liu, Yihan
Cui, Jia
Fang, Hongjuan
Wu, Ying
Zhu, Xiao
Guo, Meng
Li, Changlong
Dou, Jingtao
Chen, Zhenwen
Du, Xiaoyan
author_sort Lv, Jianyi
collection PubMed
description Long noncoding RNAs (lncRNAs) have been reported to have multiple functions and can be used as markers of various diseases, including diabetes. This study was conducted to determine the lncRNA profile in leukocytes from patients with type 2 diabetes (T2D). Differential expression of lncRNAs in T2D and type 1 diabetes (T1D) was also examined. RNA sequencing was performed in a critically grouped sample of leukocytes from T2D patients and healthy persons. A total of 845 significantly differentially expressed lncRNAs were identified, with 260 downregulated and 585 upregulated lncRNAs in T2D. The analysis of functions of DE-lncRNA and constructed co-expression networks (CNC) showed that 21 lncRNAs and 117 mRNAs harbored more than 10 related genes in CNC. Fourteen of 21 lncRNAs were confirmed to be significantly differentially expressed was detected by qPCR between the T2D and control validation cohorts. We also identified a panel of 4 lncRNAs showing significant differences in expression between T1D and T2D. Collectively, hundreds of novel DE-lncRNAs we identified in leukocytes from T2D patients will aid in epigenetic mechanism studies. Fourteen confirmed DE-lncRNAs can be regarded as diagnostic markers or regulators of T2D, including 4 lncRNAs that chould distinguish T1D and T2D in clinical practice to avoid misdiagnosis.
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spelling pubmed-87861122022-01-25 Profile Screening of Differentially Expressed lncRNAs of Circulating Leukocytes in Type 2 Diabetes Patients and Differences From Type 1 Diabetes Lv, Jianyi Liu, Yihan Cui, Jia Fang, Hongjuan Wu, Ying Zhu, Xiao Guo, Meng Li, Changlong Dou, Jingtao Chen, Zhenwen Du, Xiaoyan Front Endocrinol (Lausanne) Endocrinology Long noncoding RNAs (lncRNAs) have been reported to have multiple functions and can be used as markers of various diseases, including diabetes. This study was conducted to determine the lncRNA profile in leukocytes from patients with type 2 diabetes (T2D). Differential expression of lncRNAs in T2D and type 1 diabetes (T1D) was also examined. RNA sequencing was performed in a critically grouped sample of leukocytes from T2D patients and healthy persons. A total of 845 significantly differentially expressed lncRNAs were identified, with 260 downregulated and 585 upregulated lncRNAs in T2D. The analysis of functions of DE-lncRNA and constructed co-expression networks (CNC) showed that 21 lncRNAs and 117 mRNAs harbored more than 10 related genes in CNC. Fourteen of 21 lncRNAs were confirmed to be significantly differentially expressed was detected by qPCR between the T2D and control validation cohorts. We also identified a panel of 4 lncRNAs showing significant differences in expression between T1D and T2D. Collectively, hundreds of novel DE-lncRNAs we identified in leukocytes from T2D patients will aid in epigenetic mechanism studies. Fourteen confirmed DE-lncRNAs can be regarded as diagnostic markers or regulators of T2D, including 4 lncRNAs that chould distinguish T1D and T2D in clinical practice to avoid misdiagnosis. Frontiers Media S.A. 2022-01-10 /pmc/articles/PMC8786112/ /pubmed/35082751 http://dx.doi.org/10.3389/fendo.2021.690555 Text en Copyright © 2022 Lv, Liu, Cui, Fang, Wu, Zhu, Guo, Li, Dou, Chen and Du https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Endocrinology
Lv, Jianyi
Liu, Yihan
Cui, Jia
Fang, Hongjuan
Wu, Ying
Zhu, Xiao
Guo, Meng
Li, Changlong
Dou, Jingtao
Chen, Zhenwen
Du, Xiaoyan
Profile Screening of Differentially Expressed lncRNAs of Circulating Leukocytes in Type 2 Diabetes Patients and Differences From Type 1 Diabetes
title Profile Screening of Differentially Expressed lncRNAs of Circulating Leukocytes in Type 2 Diabetes Patients and Differences From Type 1 Diabetes
title_full Profile Screening of Differentially Expressed lncRNAs of Circulating Leukocytes in Type 2 Diabetes Patients and Differences From Type 1 Diabetes
title_fullStr Profile Screening of Differentially Expressed lncRNAs of Circulating Leukocytes in Type 2 Diabetes Patients and Differences From Type 1 Diabetes
title_full_unstemmed Profile Screening of Differentially Expressed lncRNAs of Circulating Leukocytes in Type 2 Diabetes Patients and Differences From Type 1 Diabetes
title_short Profile Screening of Differentially Expressed lncRNAs of Circulating Leukocytes in Type 2 Diabetes Patients and Differences From Type 1 Diabetes
title_sort profile screening of differentially expressed lncrnas of circulating leukocytes in type 2 diabetes patients and differences from type 1 diabetes
topic Endocrinology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8786112/
https://www.ncbi.nlm.nih.gov/pubmed/35082751
http://dx.doi.org/10.3389/fendo.2021.690555
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