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Archetypal Analysis Reveals Quantifiable Patterns of Visual Field Loss in Optic Neuritis

PURPOSE: Identifying and monitoring visual field (VF) defects due to optic neuritis (ON) relies on qualitative clinician interpretation. Archetypal analysis (AA), a form of unsupervised machine learning, is used to quantify VF defects in glaucoma. We hypothesized that AA can identify quantifiable, O...

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Autores principales: Solli, Elena, Doshi, Hiten, Elze, Tobias, Pasquale, Louis, Wall, Michael, Kupersmith, Mark
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Association for Research in Vision and Ophthalmology 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8787544/
https://www.ncbi.nlm.nih.gov/pubmed/35044445
http://dx.doi.org/10.1167/tvst.11.1.27
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author Solli, Elena
Doshi, Hiten
Elze, Tobias
Pasquale, Louis
Wall, Michael
Kupersmith, Mark
author_facet Solli, Elena
Doshi, Hiten
Elze, Tobias
Pasquale, Louis
Wall, Michael
Kupersmith, Mark
author_sort Solli, Elena
collection PubMed
description PURPOSE: Identifying and monitoring visual field (VF) defects due to optic neuritis (ON) relies on qualitative clinician interpretation. Archetypal analysis (AA), a form of unsupervised machine learning, is used to quantify VF defects in glaucoma. We hypothesized that AA can identify quantifiable, ON-specific patterns (as archetypes [ATs]) of VF loss that resemble known ON VF defects. METHODS: We applied AA to a dataset of 3892 VFs prospectively collected from 456 eyes in the Optic Neuritis Treatment Trial (ONTT), and decomposed each VF into component ATs (total weight = 100%). AA of 568 VFs from 61 control eyes was used to define a minimum meaningful (≤7%) AT weight and weight change. We correlated baseline ON AT weights with global VF indices, visual acuity, and contrast sensitivity. For eyes with a dominant AT (weight ≥50%), we compared the ONTT VF classification with the AT pattern. RESULTS: AA generated a set of 16 ATs containing patterns seen in the ONTT. These were distinct from control ATs. Baseline study eye VFs were decomposed into 2.9 ± 1.5 ATs. AT2, a global dysfunction pattern, had the highest mean weight at baseline (36%; 95% confidence interval, 33%–40%), and showed the strongest correlation with MD (r = −0.91; P < 0.001), visual acuity (r = 0.70; P < 0.001), and contrast sensitivity (r = −0.77; P < 0.001). Of 191 baseline VFs with a dominant AT, 81% matched the descriptive classifications. CONCLUSIONS: AA identifies and quantifies archetypal, ON-specific patterns of VF loss. TRANSLATIONAL RELEVANCE: AA is a quantitative, objective method for demonstrating and monitoring change in regional VF deficits in ON.
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spelling pubmed-87875442022-01-26 Archetypal Analysis Reveals Quantifiable Patterns of Visual Field Loss in Optic Neuritis Solli, Elena Doshi, Hiten Elze, Tobias Pasquale, Louis Wall, Michael Kupersmith, Mark Transl Vis Sci Technol Article PURPOSE: Identifying and monitoring visual field (VF) defects due to optic neuritis (ON) relies on qualitative clinician interpretation. Archetypal analysis (AA), a form of unsupervised machine learning, is used to quantify VF defects in glaucoma. We hypothesized that AA can identify quantifiable, ON-specific patterns (as archetypes [ATs]) of VF loss that resemble known ON VF defects. METHODS: We applied AA to a dataset of 3892 VFs prospectively collected from 456 eyes in the Optic Neuritis Treatment Trial (ONTT), and decomposed each VF into component ATs (total weight = 100%). AA of 568 VFs from 61 control eyes was used to define a minimum meaningful (≤7%) AT weight and weight change. We correlated baseline ON AT weights with global VF indices, visual acuity, and contrast sensitivity. For eyes with a dominant AT (weight ≥50%), we compared the ONTT VF classification with the AT pattern. RESULTS: AA generated a set of 16 ATs containing patterns seen in the ONTT. These were distinct from control ATs. Baseline study eye VFs were decomposed into 2.9 ± 1.5 ATs. AT2, a global dysfunction pattern, had the highest mean weight at baseline (36%; 95% confidence interval, 33%–40%), and showed the strongest correlation with MD (r = −0.91; P < 0.001), visual acuity (r = 0.70; P < 0.001), and contrast sensitivity (r = −0.77; P < 0.001). Of 191 baseline VFs with a dominant AT, 81% matched the descriptive classifications. CONCLUSIONS: AA identifies and quantifies archetypal, ON-specific patterns of VF loss. TRANSLATIONAL RELEVANCE: AA is a quantitative, objective method for demonstrating and monitoring change in regional VF deficits in ON. The Association for Research in Vision and Ophthalmology 2022-01-19 /pmc/articles/PMC8787544/ /pubmed/35044445 http://dx.doi.org/10.1167/tvst.11.1.27 Text en Copyright 2022 The Authors https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 International License.
spellingShingle Article
Solli, Elena
Doshi, Hiten
Elze, Tobias
Pasquale, Louis
Wall, Michael
Kupersmith, Mark
Archetypal Analysis Reveals Quantifiable Patterns of Visual Field Loss in Optic Neuritis
title Archetypal Analysis Reveals Quantifiable Patterns of Visual Field Loss in Optic Neuritis
title_full Archetypal Analysis Reveals Quantifiable Patterns of Visual Field Loss in Optic Neuritis
title_fullStr Archetypal Analysis Reveals Quantifiable Patterns of Visual Field Loss in Optic Neuritis
title_full_unstemmed Archetypal Analysis Reveals Quantifiable Patterns of Visual Field Loss in Optic Neuritis
title_short Archetypal Analysis Reveals Quantifiable Patterns of Visual Field Loss in Optic Neuritis
title_sort archetypal analysis reveals quantifiable patterns of visual field loss in optic neuritis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8787544/
https://www.ncbi.nlm.nih.gov/pubmed/35044445
http://dx.doi.org/10.1167/tvst.11.1.27
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