The complete chloroplast genome sequence of Bolboschoenus planiculmis (Cyperaceae)

Bolboschoenus planiculmis is a typical wetland sedge with both ecological and agricultural value. We report the first complete chloroplast genome sequence of this species. The total genome size is 186,539 bp, containing a large single-copy region (LSC) of 104,654 bp, a small single copy region (SSC)...

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Detalles Bibliográficos
Autores principales: Ning, Yu, Dong, Shu Bin, Zhao, Yu Xin, Pan, Zhe, Ma, Hua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8788363/
https://www.ncbi.nlm.nih.gov/pubmed/35087941
http://dx.doi.org/10.1080/23802359.2021.2024773
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author Ning, Yu
Dong, Shu Bin
Zhao, Yu Xin
Pan, Zhe
Ma, Hua
author_facet Ning, Yu
Dong, Shu Bin
Zhao, Yu Xin
Pan, Zhe
Ma, Hua
author_sort Ning, Yu
collection PubMed
description Bolboschoenus planiculmis is a typical wetland sedge with both ecological and agricultural value. We report the first complete chloroplast genome sequence of this species. The total genome size is 186,539 bp, containing a large single-copy region (LSC) of 104,654 bp, a small single copy region (SSC) of 9,659 bp and two inverted repeats (IRs) of 36,113 bp by each. The GC content is 33.59%. The genome encodes 105 unique genes, including 71 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. Phylogenetic analysis shows this species has a strong sister relationship with Cyperus. Our work could be helpful in understanding the evolution of Cyperaceae.
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spelling pubmed-87883632022-01-26 The complete chloroplast genome sequence of Bolboschoenus planiculmis (Cyperaceae) Ning, Yu Dong, Shu Bin Zhao, Yu Xin Pan, Zhe Ma, Hua Mitochondrial DNA B Resour Mitogenome Announcement Bolboschoenus planiculmis is a typical wetland sedge with both ecological and agricultural value. We report the first complete chloroplast genome sequence of this species. The total genome size is 186,539 bp, containing a large single-copy region (LSC) of 104,654 bp, a small single copy region (SSC) of 9,659 bp and two inverted repeats (IRs) of 36,113 bp by each. The GC content is 33.59%. The genome encodes 105 unique genes, including 71 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. Phylogenetic analysis shows this species has a strong sister relationship with Cyperus. Our work could be helpful in understanding the evolution of Cyperaceae. Taylor & Francis 2022-01-24 /pmc/articles/PMC8788363/ /pubmed/35087941 http://dx.doi.org/10.1080/23802359.2021.2024773 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Ning, Yu
Dong, Shu Bin
Zhao, Yu Xin
Pan, Zhe
Ma, Hua
The complete chloroplast genome sequence of Bolboschoenus planiculmis (Cyperaceae)
title The complete chloroplast genome sequence of Bolboschoenus planiculmis (Cyperaceae)
title_full The complete chloroplast genome sequence of Bolboschoenus planiculmis (Cyperaceae)
title_fullStr The complete chloroplast genome sequence of Bolboschoenus planiculmis (Cyperaceae)
title_full_unstemmed The complete chloroplast genome sequence of Bolboschoenus planiculmis (Cyperaceae)
title_short The complete chloroplast genome sequence of Bolboschoenus planiculmis (Cyperaceae)
title_sort complete chloroplast genome sequence of bolboschoenus planiculmis (cyperaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8788363/
https://www.ncbi.nlm.nih.gov/pubmed/35087941
http://dx.doi.org/10.1080/23802359.2021.2024773
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