Characterization of the complete plastome of Spiraea trilobata (Rosaceae), a perennial shrub

The complete plastome of Spiraea trilobata, a shrub, is determined. The plastome is 155,981 bp in length and comprises a large single-copy region (84,417 bp), a small single-copy region (18,878 bp), and a pair of inverted repeats regions (26,343 bp). A total of 113 unique genes are annotated for the...

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Autores principales: Qin, Hao, Zhu, Xinxin, Zhang, Xin, Zhang, Xuejie, Zhang, Luoyan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8788365/
https://www.ncbi.nlm.nih.gov/pubmed/35087944
http://dx.doi.org/10.1080/23802359.2021.2018948
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author Qin, Hao
Zhu, Xinxin
Zhang, Xin
Zhang, Xuejie
Zhang, Luoyan
author_facet Qin, Hao
Zhu, Xinxin
Zhang, Xin
Zhang, Xuejie
Zhang, Luoyan
author_sort Qin, Hao
collection PubMed
description The complete plastome of Spiraea trilobata, a shrub, is determined. The plastome is 155,981 bp in length and comprises a large single-copy region (84,417 bp), a small single-copy region (18,878 bp), and a pair of inverted repeats regions (26,343 bp). A total of 113 unique genes are annotated for the plastome of S. trilobata, containing 79 protein coding genes (PCGs), 30 tRNAs, and four rRNAs. The GC content of this plastome is 36.8%. Phylogenomic analysis based on 17 plastomes reveals that S. trilobata is sister to Spiraea blumei. Compared with S. blumei, S. trilobata lacks both trnM-CAU and ycf1. In addition, the GC content of both species is the same.
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spelling pubmed-87883652022-01-26 Characterization of the complete plastome of Spiraea trilobata (Rosaceae), a perennial shrub Qin, Hao Zhu, Xinxin Zhang, Xin Zhang, Xuejie Zhang, Luoyan Mitochondrial DNA B Resour Mitogenome Announcement The complete plastome of Spiraea trilobata, a shrub, is determined. The plastome is 155,981 bp in length and comprises a large single-copy region (84,417 bp), a small single-copy region (18,878 bp), and a pair of inverted repeats regions (26,343 bp). A total of 113 unique genes are annotated for the plastome of S. trilobata, containing 79 protein coding genes (PCGs), 30 tRNAs, and four rRNAs. The GC content of this plastome is 36.8%. Phylogenomic analysis based on 17 plastomes reveals that S. trilobata is sister to Spiraea blumei. Compared with S. blumei, S. trilobata lacks both trnM-CAU and ycf1. In addition, the GC content of both species is the same. Taylor & Francis 2022-01-24 /pmc/articles/PMC8788365/ /pubmed/35087944 http://dx.doi.org/10.1080/23802359.2021.2018948 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Qin, Hao
Zhu, Xinxin
Zhang, Xin
Zhang, Xuejie
Zhang, Luoyan
Characterization of the complete plastome of Spiraea trilobata (Rosaceae), a perennial shrub
title Characterization of the complete plastome of Spiraea trilobata (Rosaceae), a perennial shrub
title_full Characterization of the complete plastome of Spiraea trilobata (Rosaceae), a perennial shrub
title_fullStr Characterization of the complete plastome of Spiraea trilobata (Rosaceae), a perennial shrub
title_full_unstemmed Characterization of the complete plastome of Spiraea trilobata (Rosaceae), a perennial shrub
title_short Characterization of the complete plastome of Spiraea trilobata (Rosaceae), a perennial shrub
title_sort characterization of the complete plastome of spiraea trilobata (rosaceae), a perennial shrub
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8788365/
https://www.ncbi.nlm.nih.gov/pubmed/35087944
http://dx.doi.org/10.1080/23802359.2021.2018948
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