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Characterization of cross-species transcription and splicing from Penicillium to Saccharomyces cerevisiae
Heterologous expression of eukaryotic gene clusters in yeast has been widely used for producing high-value chemicals and bioactive secondary metabolites. However, eukaryotic transcription cis-elements are still undercharacterized, and the cross-species expression mechanism remains poorly understood....
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8788760/ https://www.ncbi.nlm.nih.gov/pubmed/34387324 http://dx.doi.org/10.1093/jimb/kuab054 |
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author | Lin, Zhenquan Xu, Kang Cai, Guang Liu, Yangqingxue Li, Yi Zhang, Zhihao Nielsen, Jens Shi, Shuobo Liu, Zihe |
author_facet | Lin, Zhenquan Xu, Kang Cai, Guang Liu, Yangqingxue Li, Yi Zhang, Zhihao Nielsen, Jens Shi, Shuobo Liu, Zihe |
author_sort | Lin, Zhenquan |
collection | PubMed |
description | Heterologous expression of eukaryotic gene clusters in yeast has been widely used for producing high-value chemicals and bioactive secondary metabolites. However, eukaryotic transcription cis-elements are still undercharacterized, and the cross-species expression mechanism remains poorly understood. Here we used the whole expression unit (including original promoter, terminator, and open reading frame with introns) of orotidine 5′-monophosphate decarboxylases from 14 Penicillium species as a showcase, and analyzed their cross-species expression in Saccharomyces cerevisiae. We found that pyrG promoters from the Penicillium species could drive URA3 expression in yeast, and that inefficient cross-species splicing of Penicillium introns might result in weak cross-species expression. Thus, this study demonstrates cross-species expression from Penicillium to yeast, and sheds light on the opportunities and challenges of cross-species expression of fungi expression units and gene clusters in yeast without refactoring for novel natural product discovery. |
format | Online Article Text |
id | pubmed-8788760 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-87887602022-06-08 Characterization of cross-species transcription and splicing from Penicillium to Saccharomyces cerevisiae Lin, Zhenquan Xu, Kang Cai, Guang Liu, Yangqingxue Li, Yi Zhang, Zhihao Nielsen, Jens Shi, Shuobo Liu, Zihe J Ind Microbiol Biotechnol Natural Products Heterologous expression of eukaryotic gene clusters in yeast has been widely used for producing high-value chemicals and bioactive secondary metabolites. However, eukaryotic transcription cis-elements are still undercharacterized, and the cross-species expression mechanism remains poorly understood. Here we used the whole expression unit (including original promoter, terminator, and open reading frame with introns) of orotidine 5′-monophosphate decarboxylases from 14 Penicillium species as a showcase, and analyzed their cross-species expression in Saccharomyces cerevisiae. We found that pyrG promoters from the Penicillium species could drive URA3 expression in yeast, and that inefficient cross-species splicing of Penicillium introns might result in weak cross-species expression. Thus, this study demonstrates cross-species expression from Penicillium to yeast, and sheds light on the opportunities and challenges of cross-species expression of fungi expression units and gene clusters in yeast without refactoring for novel natural product discovery. Oxford University Press 2021-08-13 /pmc/articles/PMC8788760/ /pubmed/34387324 http://dx.doi.org/10.1093/jimb/kuab054 Text en © The Author(s) 2021. Published by Oxford University Press on behalf of Society of Industrial Microbiology and Biotechnology. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Natural Products Lin, Zhenquan Xu, Kang Cai, Guang Liu, Yangqingxue Li, Yi Zhang, Zhihao Nielsen, Jens Shi, Shuobo Liu, Zihe Characterization of cross-species transcription and splicing from Penicillium to Saccharomyces cerevisiae |
title | Characterization of cross-species transcription and splicing from Penicillium to Saccharomyces cerevisiae |
title_full | Characterization of cross-species transcription and splicing from Penicillium to Saccharomyces cerevisiae |
title_fullStr | Characterization of cross-species transcription and splicing from Penicillium to Saccharomyces cerevisiae |
title_full_unstemmed | Characterization of cross-species transcription and splicing from Penicillium to Saccharomyces cerevisiae |
title_short | Characterization of cross-species transcription and splicing from Penicillium to Saccharomyces cerevisiae |
title_sort | characterization of cross-species transcription and splicing from penicillium to saccharomyces cerevisiae |
topic | Natural Products |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8788760/ https://www.ncbi.nlm.nih.gov/pubmed/34387324 http://dx.doi.org/10.1093/jimb/kuab054 |
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