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A capillary electrophoresis-based multiplex PCR assay for expanded carrier screening in the eastern Han Chinese population

Expanded carrier screening, a type of reproductive genetic testing for couples, has gained tremendous popularity for assessing the risk of passing on certain genetic conditions to offspring. Here, a carrier screening assay for 448 pathogenic variants was developed using capillary electrophoresis-bas...

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Autores principales: Hu, Ping, Tan, Jianxin, Yu, Feng, Shao, Binbin, Zhang, Fang, Zhang, Jingjing, Lin, Yingchun, Tao, Tao, Jiang, Lili, Jiang, Zhengwen, Xu, Zhengfeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8789796/
https://www.ncbi.nlm.nih.gov/pubmed/35079019
http://dx.doi.org/10.1038/s41525-021-00280-y
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author Hu, Ping
Tan, Jianxin
Yu, Feng
Shao, Binbin
Zhang, Fang
Zhang, Jingjing
Lin, Yingchun
Tao, Tao
Jiang, Lili
Jiang, Zhengwen
Xu, Zhengfeng
author_facet Hu, Ping
Tan, Jianxin
Yu, Feng
Shao, Binbin
Zhang, Fang
Zhang, Jingjing
Lin, Yingchun
Tao, Tao
Jiang, Lili
Jiang, Zhengwen
Xu, Zhengfeng
author_sort Hu, Ping
collection PubMed
description Expanded carrier screening, a type of reproductive genetic testing for couples, has gained tremendous popularity for assessing the risk of passing on certain genetic conditions to offspring. Here, a carrier screening assay for 448 pathogenic variants was developed using capillary electrophoresis-based multiplex PCR technology. The capillary electrophoresis-based multiplex PCR assay achieved a sensitivity, specificity, and accuracy of 97.4%, 100%, and 99.6%, respectively, in detecting the specific variants. Among the 1915 couples (3830 individuals), 708 individuals (18.5%) were identified as carriers for at least one condition. Of the 708 carriers, 633 (89.4%) were heterozygous for one condition, 71 (10.0%) for two disorders, 3 (0.4%) for three disorders, and 1 (0.1%) for four disorders. Meanwhile, 30 (1.57%) couples were identified as at‐risk couples. This study describes an inexpensive and effective method for expanded carrier screening. The simplicity and accuracy of this approach will facilitate the clinical implementation of expanded carrier screening.
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spelling pubmed-87897962022-02-07 A capillary electrophoresis-based multiplex PCR assay for expanded carrier screening in the eastern Han Chinese population Hu, Ping Tan, Jianxin Yu, Feng Shao, Binbin Zhang, Fang Zhang, Jingjing Lin, Yingchun Tao, Tao Jiang, Lili Jiang, Zhengwen Xu, Zhengfeng NPJ Genom Med Article Expanded carrier screening, a type of reproductive genetic testing for couples, has gained tremendous popularity for assessing the risk of passing on certain genetic conditions to offspring. Here, a carrier screening assay for 448 pathogenic variants was developed using capillary electrophoresis-based multiplex PCR technology. The capillary electrophoresis-based multiplex PCR assay achieved a sensitivity, specificity, and accuracy of 97.4%, 100%, and 99.6%, respectively, in detecting the specific variants. Among the 1915 couples (3830 individuals), 708 individuals (18.5%) were identified as carriers for at least one condition. Of the 708 carriers, 633 (89.4%) were heterozygous for one condition, 71 (10.0%) for two disorders, 3 (0.4%) for three disorders, and 1 (0.1%) for four disorders. Meanwhile, 30 (1.57%) couples were identified as at‐risk couples. This study describes an inexpensive and effective method for expanded carrier screening. The simplicity and accuracy of this approach will facilitate the clinical implementation of expanded carrier screening. Nature Publishing Group UK 2022-01-25 /pmc/articles/PMC8789796/ /pubmed/35079019 http://dx.doi.org/10.1038/s41525-021-00280-y Text en © The Author(s) 2022, corrected publication 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Hu, Ping
Tan, Jianxin
Yu, Feng
Shao, Binbin
Zhang, Fang
Zhang, Jingjing
Lin, Yingchun
Tao, Tao
Jiang, Lili
Jiang, Zhengwen
Xu, Zhengfeng
A capillary electrophoresis-based multiplex PCR assay for expanded carrier screening in the eastern Han Chinese population
title A capillary electrophoresis-based multiplex PCR assay for expanded carrier screening in the eastern Han Chinese population
title_full A capillary electrophoresis-based multiplex PCR assay for expanded carrier screening in the eastern Han Chinese population
title_fullStr A capillary electrophoresis-based multiplex PCR assay for expanded carrier screening in the eastern Han Chinese population
title_full_unstemmed A capillary electrophoresis-based multiplex PCR assay for expanded carrier screening in the eastern Han Chinese population
title_short A capillary electrophoresis-based multiplex PCR assay for expanded carrier screening in the eastern Han Chinese population
title_sort capillary electrophoresis-based multiplex pcr assay for expanded carrier screening in the eastern han chinese population
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8789796/
https://www.ncbi.nlm.nih.gov/pubmed/35079019
http://dx.doi.org/10.1038/s41525-021-00280-y
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