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Development and Validation of the Radiology Common Data Model (R-CDM) for the International Standardization of Medical Imaging Data
PURPOSE: Digital Imaging and Communications in Medicine (DICOM), a standard file format for medical imaging data, contains metadata describing each file. However, metadata are often incomplete, and there is no standardized format for recording metadata, leading to inefficiency during the metadata-ba...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Yonsei University College of Medicine
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8790584/ https://www.ncbi.nlm.nih.gov/pubmed/35040608 http://dx.doi.org/10.3349/ymj.2022.63.S74 |
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author | Park, ChulHyoung You, Seng Chan Jeon, Hokyun Jeong, Chang Won Choi, Jin Wook Park, Rae Woong |
author_facet | Park, ChulHyoung You, Seng Chan Jeon, Hokyun Jeong, Chang Won Choi, Jin Wook Park, Rae Woong |
author_sort | Park, ChulHyoung |
collection | PubMed |
description | PURPOSE: Digital Imaging and Communications in Medicine (DICOM), a standard file format for medical imaging data, contains metadata describing each file. However, metadata are often incomplete, and there is no standardized format for recording metadata, leading to inefficiency during the metadata-based data retrieval process. Here, we propose a novel standardization method for DICOM metadata termed the Radiology Common Data Model (R-CDM). MATERIALS AND METHODS: R-CDM was designed to be compatible with Health Level Seven International (HL7)/Fast Healthcare Interoperability Resources (FHIR) and linked with the Observational Medical Outcomes Partnership (OMOP)-CDM to achieve a seamless link between clinical data and medical imaging data. The terminology system was standardized using the RadLex playbook, a comprehensive lexicon of radiology. As a proof of concept, the R-CDM conversion process was conducted with 41.7 TB of data from the Ajou University Hospital. The R-CDM database visualizer was developed to visualize the main characteristics of the R-CDM database. RESULTS: Information from 2801360 cases and 87203226 DICOM files was organized into two tables constituting the R-CDM. Information on imaging device and image resolution was recorded with more than 99.9% accuracy. Furthermore, OMOP-CDM and R-CDM were linked to efficiently extract specific types of images from specific patient cohorts. CONCLUSION: R-CDM standardizes the structure and terminology for recording medical imaging data to eliminate incomplete and unstandardized information. Successful standardization was achieved by the extract, transform, and load process and image classifier. We hope that the R-CDM will contribute to deep learning research in the medical imaging field by enabling the securement of large-scale medical imaging data from multinational institutions. |
format | Online Article Text |
id | pubmed-8790584 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Yonsei University College of Medicine |
record_format | MEDLINE/PubMed |
spelling | pubmed-87905842022-02-02 Development and Validation of the Radiology Common Data Model (R-CDM) for the International Standardization of Medical Imaging Data Park, ChulHyoung You, Seng Chan Jeon, Hokyun Jeong, Chang Won Choi, Jin Wook Park, Rae Woong Yonsei Med J Original Article PURPOSE: Digital Imaging and Communications in Medicine (DICOM), a standard file format for medical imaging data, contains metadata describing each file. However, metadata are often incomplete, and there is no standardized format for recording metadata, leading to inefficiency during the metadata-based data retrieval process. Here, we propose a novel standardization method for DICOM metadata termed the Radiology Common Data Model (R-CDM). MATERIALS AND METHODS: R-CDM was designed to be compatible with Health Level Seven International (HL7)/Fast Healthcare Interoperability Resources (FHIR) and linked with the Observational Medical Outcomes Partnership (OMOP)-CDM to achieve a seamless link between clinical data and medical imaging data. The terminology system was standardized using the RadLex playbook, a comprehensive lexicon of radiology. As a proof of concept, the R-CDM conversion process was conducted with 41.7 TB of data from the Ajou University Hospital. The R-CDM database visualizer was developed to visualize the main characteristics of the R-CDM database. RESULTS: Information from 2801360 cases and 87203226 DICOM files was organized into two tables constituting the R-CDM. Information on imaging device and image resolution was recorded with more than 99.9% accuracy. Furthermore, OMOP-CDM and R-CDM were linked to efficiently extract specific types of images from specific patient cohorts. CONCLUSION: R-CDM standardizes the structure and terminology for recording medical imaging data to eliminate incomplete and unstandardized information. Successful standardization was achieved by the extract, transform, and load process and image classifier. We hope that the R-CDM will contribute to deep learning research in the medical imaging field by enabling the securement of large-scale medical imaging data from multinational institutions. Yonsei University College of Medicine 2022-01 2022-01-06 /pmc/articles/PMC8790584/ /pubmed/35040608 http://dx.doi.org/10.3349/ymj.2022.63.S74 Text en © Copyright: Yonsei University College of Medicine 2022 https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (https://creativecommons.org/licenses/by-nc/4.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Park, ChulHyoung You, Seng Chan Jeon, Hokyun Jeong, Chang Won Choi, Jin Wook Park, Rae Woong Development and Validation of the Radiology Common Data Model (R-CDM) for the International Standardization of Medical Imaging Data |
title | Development and Validation of the Radiology Common Data Model (R-CDM) for the International Standardization of Medical Imaging Data |
title_full | Development and Validation of the Radiology Common Data Model (R-CDM) for the International Standardization of Medical Imaging Data |
title_fullStr | Development and Validation of the Radiology Common Data Model (R-CDM) for the International Standardization of Medical Imaging Data |
title_full_unstemmed | Development and Validation of the Radiology Common Data Model (R-CDM) for the International Standardization of Medical Imaging Data |
title_short | Development and Validation of the Radiology Common Data Model (R-CDM) for the International Standardization of Medical Imaging Data |
title_sort | development and validation of the radiology common data model (r-cdm) for the international standardization of medical imaging data |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8790584/ https://www.ncbi.nlm.nih.gov/pubmed/35040608 http://dx.doi.org/10.3349/ymj.2022.63.S74 |
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