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RPP25 as a Prognostic-Related Biomarker That Correlates With Tumor Metabolism in Glioblastoma

RPP25, a 25 kDa protein subunit of ribonuclease P (RNase P), is a protein-coding gene. Disorders associated with RPP25 include chromosome 15Q24 deletion syndrome and diffuse scleroderma, while systemic sclerosis can be complicated by malignancy. However, the functional role of RPP25 expression in gl...

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Autores principales: Xiao, Dongdong, Wu, Jingnan, Zhao, Hongyang, Jiang, Xiaobing, Nie, Chuansheng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8790702/
https://www.ncbi.nlm.nih.gov/pubmed/35096558
http://dx.doi.org/10.3389/fonc.2021.714904
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author Xiao, Dongdong
Wu, Jingnan
Zhao, Hongyang
Jiang, Xiaobing
Nie, Chuansheng
author_facet Xiao, Dongdong
Wu, Jingnan
Zhao, Hongyang
Jiang, Xiaobing
Nie, Chuansheng
author_sort Xiao, Dongdong
collection PubMed
description RPP25, a 25 kDa protein subunit of ribonuclease P (RNase P), is a protein-coding gene. Disorders associated with RPP25 include chromosome 15Q24 deletion syndrome and diffuse scleroderma, while systemic sclerosis can be complicated by malignancy. However, the functional role of RPP25 expression in glioblastoma multiforme (GBM) is unclear. In this study, comprehensive bioinformatics analysis was used to evaluate the impact of RPP25 on GBM occurrence and prognosis. Differential analysis of multiple databases showed that RPP25 was commonly highly expressed in multiple cancers but lowly expressed in GBM. Survival prognostic results showed that RPP25 was prognostically relevant in six tumors (CESC, GBM, LAML, LUAD, SKCM, and UVM), but high RPP25 expression was significantly associated with poor patient prognosis except for CESC. Analysis of RPP25 expression in GBM alone revealed that RPP25 was significantly downregulated in GBM compared with normal tissue. Receiver operating characteristic (ROC) combined with Kaplan-Meier (KM) analysis and Cox regression analysis showed that high RPP25 expression was a prognostic risk factor for GBM and had a predictive value for the 1-year, 2-year, and 3-year survival of GBM patients. In addition, the expression of RPP25 was correlated with the level of immune cell infiltration. The gene set enrichment analysis (GSEA) results showed that RPP25 was mainly associated with signalling pathways related to tumor progression and tumor metabolism.
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spelling pubmed-87907022022-01-27 RPP25 as a Prognostic-Related Biomarker That Correlates With Tumor Metabolism in Glioblastoma Xiao, Dongdong Wu, Jingnan Zhao, Hongyang Jiang, Xiaobing Nie, Chuansheng Front Oncol Oncology RPP25, a 25 kDa protein subunit of ribonuclease P (RNase P), is a protein-coding gene. Disorders associated with RPP25 include chromosome 15Q24 deletion syndrome and diffuse scleroderma, while systemic sclerosis can be complicated by malignancy. However, the functional role of RPP25 expression in glioblastoma multiforme (GBM) is unclear. In this study, comprehensive bioinformatics analysis was used to evaluate the impact of RPP25 on GBM occurrence and prognosis. Differential analysis of multiple databases showed that RPP25 was commonly highly expressed in multiple cancers but lowly expressed in GBM. Survival prognostic results showed that RPP25 was prognostically relevant in six tumors (CESC, GBM, LAML, LUAD, SKCM, and UVM), but high RPP25 expression was significantly associated with poor patient prognosis except for CESC. Analysis of RPP25 expression in GBM alone revealed that RPP25 was significantly downregulated in GBM compared with normal tissue. Receiver operating characteristic (ROC) combined with Kaplan-Meier (KM) analysis and Cox regression analysis showed that high RPP25 expression was a prognostic risk factor for GBM and had a predictive value for the 1-year, 2-year, and 3-year survival of GBM patients. In addition, the expression of RPP25 was correlated with the level of immune cell infiltration. The gene set enrichment analysis (GSEA) results showed that RPP25 was mainly associated with signalling pathways related to tumor progression and tumor metabolism. Frontiers Media S.A. 2022-01-12 /pmc/articles/PMC8790702/ /pubmed/35096558 http://dx.doi.org/10.3389/fonc.2021.714904 Text en Copyright © 2022 Xiao, Wu, Zhao, Jiang and Nie https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Xiao, Dongdong
Wu, Jingnan
Zhao, Hongyang
Jiang, Xiaobing
Nie, Chuansheng
RPP25 as a Prognostic-Related Biomarker That Correlates With Tumor Metabolism in Glioblastoma
title RPP25 as a Prognostic-Related Biomarker That Correlates With Tumor Metabolism in Glioblastoma
title_full RPP25 as a Prognostic-Related Biomarker That Correlates With Tumor Metabolism in Glioblastoma
title_fullStr RPP25 as a Prognostic-Related Biomarker That Correlates With Tumor Metabolism in Glioblastoma
title_full_unstemmed RPP25 as a Prognostic-Related Biomarker That Correlates With Tumor Metabolism in Glioblastoma
title_short RPP25 as a Prognostic-Related Biomarker That Correlates With Tumor Metabolism in Glioblastoma
title_sort rpp25 as a prognostic-related biomarker that correlates with tumor metabolism in glioblastoma
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8790702/
https://www.ncbi.nlm.nih.gov/pubmed/35096558
http://dx.doi.org/10.3389/fonc.2021.714904
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