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Determinants of Membrane Orientation Dynamics in Lipid-Modified Small GTPases
[Image: see text] The transient membrane engagement and reorientation of the soluble catalytic domain of Ras proteins has emerged as an important modulator of their functions. However, there has been limited information on whether this phenomenon is applicable to other members of the Ras superfamily...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8790735/ https://www.ncbi.nlm.nih.gov/pubmed/35098229 http://dx.doi.org/10.1021/jacsau.1c00426 |
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author | Prakash, Priyanka Gorfe, Alemayehu A. |
author_facet | Prakash, Priyanka Gorfe, Alemayehu A. |
author_sort | Prakash, Priyanka |
collection | PubMed |
description | [Image: see text] The transient membrane engagement and reorientation of the soluble catalytic domain of Ras proteins has emerged as an important modulator of their functions. However, there has been limited information on whether this phenomenon is applicable to other members of the Ras superfamily. To address this issue, we conducted long-time-scale atomistic molecular dynamics simulations (55 μs aggregate simulation time) on representatives of the Ras, Rho, and Arf family proteins that differ in sequence, lipid modification, and the rigidity of the linker between the lipid anchor and the catalytic G-domain. The results show that the concept of membrane reorientation is generalizable to most but not all members of the Ras superfamily. Specifically, C-terminally prenylated small GTPases that are anchored to membranes via a single flexible linker adopt multiple orientations, whereas those that are N-terminally myristoylated and harbor a rigid linker experience limited orientational dynamics. Combined with published reports on Ras proteins, these observations provide insights into the common principles and determinants of the orientational dynamics of lipidated small GTPases on membrane surfaces and offer new ways of thinking about the regulation and druggability of the Ras superfamily proteins. |
format | Online Article Text |
id | pubmed-8790735 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-87907352022-01-27 Determinants of Membrane Orientation Dynamics in Lipid-Modified Small GTPases Prakash, Priyanka Gorfe, Alemayehu A. JACS Au [Image: see text] The transient membrane engagement and reorientation of the soluble catalytic domain of Ras proteins has emerged as an important modulator of their functions. However, there has been limited information on whether this phenomenon is applicable to other members of the Ras superfamily. To address this issue, we conducted long-time-scale atomistic molecular dynamics simulations (55 μs aggregate simulation time) on representatives of the Ras, Rho, and Arf family proteins that differ in sequence, lipid modification, and the rigidity of the linker between the lipid anchor and the catalytic G-domain. The results show that the concept of membrane reorientation is generalizable to most but not all members of the Ras superfamily. Specifically, C-terminally prenylated small GTPases that are anchored to membranes via a single flexible linker adopt multiple orientations, whereas those that are N-terminally myristoylated and harbor a rigid linker experience limited orientational dynamics. Combined with published reports on Ras proteins, these observations provide insights into the common principles and determinants of the orientational dynamics of lipidated small GTPases on membrane surfaces and offer new ways of thinking about the regulation and druggability of the Ras superfamily proteins. American Chemical Society 2021-12-03 /pmc/articles/PMC8790735/ /pubmed/35098229 http://dx.doi.org/10.1021/jacsau.1c00426 Text en © 2021 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Prakash, Priyanka Gorfe, Alemayehu A. Determinants of Membrane Orientation Dynamics in Lipid-Modified Small GTPases |
title | Determinants of Membrane Orientation Dynamics in Lipid-Modified
Small GTPases |
title_full | Determinants of Membrane Orientation Dynamics in Lipid-Modified
Small GTPases |
title_fullStr | Determinants of Membrane Orientation Dynamics in Lipid-Modified
Small GTPases |
title_full_unstemmed | Determinants of Membrane Orientation Dynamics in Lipid-Modified
Small GTPases |
title_short | Determinants of Membrane Orientation Dynamics in Lipid-Modified
Small GTPases |
title_sort | determinants of membrane orientation dynamics in lipid-modified
small gtpases |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8790735/ https://www.ncbi.nlm.nih.gov/pubmed/35098229 http://dx.doi.org/10.1021/jacsau.1c00426 |
work_keys_str_mv | AT prakashpriyanka determinantsofmembraneorientationdynamicsinlipidmodifiedsmallgtpases AT gorfealemayehua determinantsofmembraneorientationdynamicsinlipidmodifiedsmallgtpases |