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Identification of candidate targets and mechanisms involved in miRNA regulation in multiple myeloma
BACKGROUND: Multiple myeloma (MM) is a complex disease affected by many factors. The recognition of miRNA networks is helpful for specific detection and personalised treatment. METHODS: mRNA expression profiles were obtained from GSE39754 and GSE87830, and differentially expressed mRNAs (DEmRs) betw...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8790927/ https://www.ncbi.nlm.nih.gov/pubmed/35081971 http://dx.doi.org/10.1186/s12957-021-02482-1 |
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author | Yang, Yang Ding, Rong Wang, Rui |
author_facet | Yang, Yang Ding, Rong Wang, Rui |
author_sort | Yang, Yang |
collection | PubMed |
description | BACKGROUND: Multiple myeloma (MM) is a complex disease affected by many factors. The recognition of miRNA networks is helpful for specific detection and personalised treatment. METHODS: mRNA expression profiles were obtained from GSE39754 and GSE87830, and differentially expressed mRNAs (DEmRs) between MM and controls were identified. The intersection of the two sets of DEmRs in GSE39754 and GSE87830 was identified as common mRNAs, and enrichment analysis was subsequently performed. Moreover, we analysed differentially expressed miRNAs (DEmiRs) between MM and controls in GSE87830. A regulatory network of target mRNAs related to the overall survival of MM patients was then constructed. RESULTS: In this study, a total of 356 common mRNAs were identified that were significantly enriched in neutrophil-mediated immunity, Th17 cell differentiation and PI3K-Akt signalling pathways. Moreover, we identified 103 DEmiRs and predicted 91 differentially expressed mRNAs as target mRNAs. Cox regression analysis was used to screen 14 target mRNAs that significantly affected the survival of MM patients. In the constructed integrated regulatory network, HIF1A and THBS1 were found to participate in Th17 cell differentiation and PI3K-Akt signalling pathways. CONCLUSION: These findings improve the understanding of the regulatory mechanisms of MM. Genes that are part of integrated regulatory networks may represent candidate targets for MM treatment. |
format | Online Article Text |
id | pubmed-8790927 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-87909272022-01-26 Identification of candidate targets and mechanisms involved in miRNA regulation in multiple myeloma Yang, Yang Ding, Rong Wang, Rui World J Surg Oncol Research BACKGROUND: Multiple myeloma (MM) is a complex disease affected by many factors. The recognition of miRNA networks is helpful for specific detection and personalised treatment. METHODS: mRNA expression profiles were obtained from GSE39754 and GSE87830, and differentially expressed mRNAs (DEmRs) between MM and controls were identified. The intersection of the two sets of DEmRs in GSE39754 and GSE87830 was identified as common mRNAs, and enrichment analysis was subsequently performed. Moreover, we analysed differentially expressed miRNAs (DEmiRs) between MM and controls in GSE87830. A regulatory network of target mRNAs related to the overall survival of MM patients was then constructed. RESULTS: In this study, a total of 356 common mRNAs were identified that were significantly enriched in neutrophil-mediated immunity, Th17 cell differentiation and PI3K-Akt signalling pathways. Moreover, we identified 103 DEmiRs and predicted 91 differentially expressed mRNAs as target mRNAs. Cox regression analysis was used to screen 14 target mRNAs that significantly affected the survival of MM patients. In the constructed integrated regulatory network, HIF1A and THBS1 were found to participate in Th17 cell differentiation and PI3K-Akt signalling pathways. CONCLUSION: These findings improve the understanding of the regulatory mechanisms of MM. Genes that are part of integrated regulatory networks may represent candidate targets for MM treatment. BioMed Central 2022-01-26 /pmc/articles/PMC8790927/ /pubmed/35081971 http://dx.doi.org/10.1186/s12957-021-02482-1 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Yang, Yang Ding, Rong Wang, Rui Identification of candidate targets and mechanisms involved in miRNA regulation in multiple myeloma |
title | Identification of candidate targets and mechanisms involved in miRNA regulation in multiple myeloma |
title_full | Identification of candidate targets and mechanisms involved in miRNA regulation in multiple myeloma |
title_fullStr | Identification of candidate targets and mechanisms involved in miRNA regulation in multiple myeloma |
title_full_unstemmed | Identification of candidate targets and mechanisms involved in miRNA regulation in multiple myeloma |
title_short | Identification of candidate targets and mechanisms involved in miRNA regulation in multiple myeloma |
title_sort | identification of candidate targets and mechanisms involved in mirna regulation in multiple myeloma |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8790927/ https://www.ncbi.nlm.nih.gov/pubmed/35081971 http://dx.doi.org/10.1186/s12957-021-02482-1 |
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