Cargando…
Assessing the impact of the density and sparsity of the network on community detection using a Gaussian mixture random partition graph generator
Identification of sub-networks within a network is essential to understand the functionality of a network. This process is called as ’Community detection’. There are various existing community detection algorithms, and the performance of these algorithms can be varied based on the network structure....
Autores principales: | , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Singapore
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8794047/ https://www.ncbi.nlm.nih.gov/pubmed/35106437 http://dx.doi.org/10.1007/s41870-022-00873-5 |
_version_ | 1784640740675026944 |
---|---|
author | Wickramasinghe, Ashani Muthukumarana, Saman |
author_facet | Wickramasinghe, Ashani Muthukumarana, Saman |
author_sort | Wickramasinghe, Ashani |
collection | PubMed |
description | Identification of sub-networks within a network is essential to understand the functionality of a network. This process is called as ’Community detection’. There are various existing community detection algorithms, and the performance of these algorithms can be varied based on the network structure. In this paper, we introduce a novel random graph generator using a mixture of Gaussian distributions. The community sizes of the generated network depend on the given Gaussian distributions. We then develop simulation studies to understand the impact of density and sparsity of the network on community detection. We use Infomap, Label propagation, Spinglass, and Louvain algorithms to detect communities. The similarity between true communities and detected communities is evaluated using Adjusted Rand Index, Adjusted Mutual Information, and Normalized Mutual Information similarity scores. We also develop a method to generate heatmaps to compare those similarity score values. The results indicate that the Louvain algorithm has the highest capacity to detect perfect communities while Label Propagation has the lowest capacity |
format | Online Article Text |
id | pubmed-8794047 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer Singapore |
record_format | MEDLINE/PubMed |
spelling | pubmed-87940472022-01-28 Assessing the impact of the density and sparsity of the network on community detection using a Gaussian mixture random partition graph generator Wickramasinghe, Ashani Muthukumarana, Saman Int J Inf Technol Original Research Identification of sub-networks within a network is essential to understand the functionality of a network. This process is called as ’Community detection’. There are various existing community detection algorithms, and the performance of these algorithms can be varied based on the network structure. In this paper, we introduce a novel random graph generator using a mixture of Gaussian distributions. The community sizes of the generated network depend on the given Gaussian distributions. We then develop simulation studies to understand the impact of density and sparsity of the network on community detection. We use Infomap, Label propagation, Spinglass, and Louvain algorithms to detect communities. The similarity between true communities and detected communities is evaluated using Adjusted Rand Index, Adjusted Mutual Information, and Normalized Mutual Information similarity scores. We also develop a method to generate heatmaps to compare those similarity score values. The results indicate that the Louvain algorithm has the highest capacity to detect perfect communities while Label Propagation has the lowest capacity Springer Singapore 2022-01-27 2022 /pmc/articles/PMC8794047/ /pubmed/35106437 http://dx.doi.org/10.1007/s41870-022-00873-5 Text en © The Author(s), under exclusive licence to Bharati Vidyapeeth's Institute of Computer Applications and Management 2022 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic. |
spellingShingle | Original Research Wickramasinghe, Ashani Muthukumarana, Saman Assessing the impact of the density and sparsity of the network on community detection using a Gaussian mixture random partition graph generator |
title | Assessing the impact of the density and sparsity of the network on community detection using a Gaussian mixture random partition graph generator |
title_full | Assessing the impact of the density and sparsity of the network on community detection using a Gaussian mixture random partition graph generator |
title_fullStr | Assessing the impact of the density and sparsity of the network on community detection using a Gaussian mixture random partition graph generator |
title_full_unstemmed | Assessing the impact of the density and sparsity of the network on community detection using a Gaussian mixture random partition graph generator |
title_short | Assessing the impact of the density and sparsity of the network on community detection using a Gaussian mixture random partition graph generator |
title_sort | assessing the impact of the density and sparsity of the network on community detection using a gaussian mixture random partition graph generator |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8794047/ https://www.ncbi.nlm.nih.gov/pubmed/35106437 http://dx.doi.org/10.1007/s41870-022-00873-5 |
work_keys_str_mv | AT wickramasingheashani assessingtheimpactofthedensityandsparsityofthenetworkoncommunitydetectionusingagaussianmixturerandompartitiongraphgenerator AT muthukumaranasaman assessingtheimpactofthedensityandsparsityofthenetworkoncommunitydetectionusingagaussianmixturerandompartitiongraphgenerator |