Cargando…

A social perspective on perceived distances reveals deep community structure

Community structure, including relationships between and within groups, is foundational to our understanding of the world around us. For dissimilarity-based data, leveraging social concepts of conflict and alignment, we provide an approach for capturing meaningful structural information resulting fr...

Descripción completa

Detalles Bibliográficos
Autores principales: Berenhaut, Kenneth S., Moore, Katherine E., Melvin, Ryan L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: National Academy of Sciences 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8794844/
https://www.ncbi.nlm.nih.gov/pubmed/35064077
http://dx.doi.org/10.1073/pnas.2003634119
_version_ 1784640913740398592
author Berenhaut, Kenneth S.
Moore, Katherine E.
Melvin, Ryan L.
author_facet Berenhaut, Kenneth S.
Moore, Katherine E.
Melvin, Ryan L.
author_sort Berenhaut, Kenneth S.
collection PubMed
description Community structure, including relationships between and within groups, is foundational to our understanding of the world around us. For dissimilarity-based data, leveraging social concepts of conflict and alignment, we provide an approach for capturing meaningful structural information resulting from induced local comparisons. In particular, a measure of local (community) depth is introduced that leads directly to a probabilistic partitioning conveying locally interpreted closeness (or cohesion). A universal choice of threshold for distinguishing strongly and weakly cohesive pairs permits consideration of both local and global structure. Cases in which one might benefit from use of the approach include data with varying density such as that arising as snapshots of complex processes in which differing mechanisms drive evolution locally. The inherent recalibrating in response to density allows one to sidestep the need for localizing parameters, common to many existing methods. Mathematical results together with applications in linguistics, cultural psychology, and genetics, as well as to benchmark clustering data have been included. Together, these demonstrate how meaningful community structure can be identified without additional inputs (e.g., number of clusters or neighborhood size), optimization criteria, iterative procedures, or distributional assumptions.
format Online
Article
Text
id pubmed-8794844
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher National Academy of Sciences
record_format MEDLINE/PubMed
spelling pubmed-87948442022-07-21 A social perspective on perceived distances reveals deep community structure Berenhaut, Kenneth S. Moore, Katherine E. Melvin, Ryan L. Proc Natl Acad Sci U S A Physical Sciences Community structure, including relationships between and within groups, is foundational to our understanding of the world around us. For dissimilarity-based data, leveraging social concepts of conflict and alignment, we provide an approach for capturing meaningful structural information resulting from induced local comparisons. In particular, a measure of local (community) depth is introduced that leads directly to a probabilistic partitioning conveying locally interpreted closeness (or cohesion). A universal choice of threshold for distinguishing strongly and weakly cohesive pairs permits consideration of both local and global structure. Cases in which one might benefit from use of the approach include data with varying density such as that arising as snapshots of complex processes in which differing mechanisms drive evolution locally. The inherent recalibrating in response to density allows one to sidestep the need for localizing parameters, common to many existing methods. Mathematical results together with applications in linguistics, cultural psychology, and genetics, as well as to benchmark clustering data have been included. Together, these demonstrate how meaningful community structure can be identified without additional inputs (e.g., number of clusters or neighborhood size), optimization criteria, iterative procedures, or distributional assumptions. National Academy of Sciences 2022-01-21 2022-01-25 /pmc/articles/PMC8794844/ /pubmed/35064077 http://dx.doi.org/10.1073/pnas.2003634119 Text en Copyright © 2022 the Author(s). Published by PNAS. https://creativecommons.org/licenses/by-nc-nd/4.0/This article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND) (https://creativecommons.org/licenses/by-nc-nd/4.0/) .
spellingShingle Physical Sciences
Berenhaut, Kenneth S.
Moore, Katherine E.
Melvin, Ryan L.
A social perspective on perceived distances reveals deep community structure
title A social perspective on perceived distances reveals deep community structure
title_full A social perspective on perceived distances reveals deep community structure
title_fullStr A social perspective on perceived distances reveals deep community structure
title_full_unstemmed A social perspective on perceived distances reveals deep community structure
title_short A social perspective on perceived distances reveals deep community structure
title_sort social perspective on perceived distances reveals deep community structure
topic Physical Sciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8794844/
https://www.ncbi.nlm.nih.gov/pubmed/35064077
http://dx.doi.org/10.1073/pnas.2003634119
work_keys_str_mv AT berenhautkenneths asocialperspectiveonperceiveddistancesrevealsdeepcommunitystructure
AT moorekatherinee asocialperspectiveonperceiveddistancesrevealsdeepcommunitystructure
AT melvinryanl asocialperspectiveonperceiveddistancesrevealsdeepcommunitystructure
AT berenhautkenneths socialperspectiveonperceiveddistancesrevealsdeepcommunitystructure
AT moorekatherinee socialperspectiveonperceiveddistancesrevealsdeepcommunitystructure
AT melvinryanl socialperspectiveonperceiveddistancesrevealsdeepcommunitystructure