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Standards recommendations for the Earth BioGenome Project
A global international initiative, such as the Earth BioGenome Project (EBP), requires both agreement and coordination on standards to ensure that the collective effort generates rapid progress toward its goals. To this end, the EBP initiated five technical standards committees comprising volunteer...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
National Academy of Sciences
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8795494/ https://www.ncbi.nlm.nih.gov/pubmed/35042802 http://dx.doi.org/10.1073/pnas.2115639118 |
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author | Lawniczak, Mara K. N. Durbin, Richard Flicek, Paul Lindblad-Toh, Kerstin Wei, Xiaofeng Archibald, John M. Baker, William J. Belov, Katherine Blaxter, Mark L. Marques Bonet, Tomas Childers, Anna K. Coddington, Jonathan A. Crandall, Keith A. Crawford, Andrew J. Davey, Robert P. Di Palma, Federica Fang, Qi Haerty, Wilfried Hall, Neil Hoff, Katharina J. Howe, Kerstin Jarvis, Erich D. Johnson, Warren E. Johnson, Rebecca N. Kersey, Paul J. Liu, Xin Lopez, Jose Victor Myers, Eugene W. Pettersson, Olga Vinnere Phillippy, Adam M. Poelchau, Monica F. Pruitt, Kim D. Rhie, Arang Castilla-Rubio, Juan Carlos Sahu, Sunil Kumar Salmon, Nicholas A. Soltis, Pamela S. Swarbreck, David Thibaud-Nissen, Françoise Wang, Sibo Wegrzyn, Jill L. Zhang, Guojie Zhang, He Lewin, Harris A. Richards, Stephen |
author_facet | Lawniczak, Mara K. N. Durbin, Richard Flicek, Paul Lindblad-Toh, Kerstin Wei, Xiaofeng Archibald, John M. Baker, William J. Belov, Katherine Blaxter, Mark L. Marques Bonet, Tomas Childers, Anna K. Coddington, Jonathan A. Crandall, Keith A. Crawford, Andrew J. Davey, Robert P. Di Palma, Federica Fang, Qi Haerty, Wilfried Hall, Neil Hoff, Katharina J. Howe, Kerstin Jarvis, Erich D. Johnson, Warren E. Johnson, Rebecca N. Kersey, Paul J. Liu, Xin Lopez, Jose Victor Myers, Eugene W. Pettersson, Olga Vinnere Phillippy, Adam M. Poelchau, Monica F. Pruitt, Kim D. Rhie, Arang Castilla-Rubio, Juan Carlos Sahu, Sunil Kumar Salmon, Nicholas A. Soltis, Pamela S. Swarbreck, David Thibaud-Nissen, Françoise Wang, Sibo Wegrzyn, Jill L. Zhang, Guojie Zhang, He Lewin, Harris A. Richards, Stephen |
author_sort | Lawniczak, Mara K. N. |
collection | PubMed |
description | A global international initiative, such as the Earth BioGenome Project (EBP), requires both agreement and coordination on standards to ensure that the collective effort generates rapid progress toward its goals. To this end, the EBP initiated five technical standards committees comprising volunteer members from the global genomics scientific community: Sample Collection and Processing, Sequencing and Assembly, Annotation, Analysis, and IT and Informatics. The current versions of the resulting standards documents are available on the EBP website, with the recognition that opportunities, technologies, and challenges may improve or change in the future, requiring flexibility for the EBP to meet its goals. Here, we describe some highlights from the proposed standards, and areas where additional challenges will need to be met. |
format | Online Article Text |
id | pubmed-8795494 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | National Academy of Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-87954942022-02-03 Standards recommendations for the Earth BioGenome Project Lawniczak, Mara K. N. Durbin, Richard Flicek, Paul Lindblad-Toh, Kerstin Wei, Xiaofeng Archibald, John M. Baker, William J. Belov, Katherine Blaxter, Mark L. Marques Bonet, Tomas Childers, Anna K. Coddington, Jonathan A. Crandall, Keith A. Crawford, Andrew J. Davey, Robert P. Di Palma, Federica Fang, Qi Haerty, Wilfried Hall, Neil Hoff, Katharina J. Howe, Kerstin Jarvis, Erich D. Johnson, Warren E. Johnson, Rebecca N. Kersey, Paul J. Liu, Xin Lopez, Jose Victor Myers, Eugene W. Pettersson, Olga Vinnere Phillippy, Adam M. Poelchau, Monica F. Pruitt, Kim D. Rhie, Arang Castilla-Rubio, Juan Carlos Sahu, Sunil Kumar Salmon, Nicholas A. Soltis, Pamela S. Swarbreck, David Thibaud-Nissen, Françoise Wang, Sibo Wegrzyn, Jill L. Zhang, Guojie Zhang, He Lewin, Harris A. Richards, Stephen Proc Natl Acad Sci U S A The Earth BioGenome Project: The Launch of a Moonshot for Biology A global international initiative, such as the Earth BioGenome Project (EBP), requires both agreement and coordination on standards to ensure that the collective effort generates rapid progress toward its goals. To this end, the EBP initiated five technical standards committees comprising volunteer members from the global genomics scientific community: Sample Collection and Processing, Sequencing and Assembly, Annotation, Analysis, and IT and Informatics. The current versions of the resulting standards documents are available on the EBP website, with the recognition that opportunities, technologies, and challenges may improve or change in the future, requiring flexibility for the EBP to meet its goals. Here, we describe some highlights from the proposed standards, and areas where additional challenges will need to be met. National Academy of Sciences 2022-01-18 2022-01-25 /pmc/articles/PMC8795494/ /pubmed/35042802 http://dx.doi.org/10.1073/pnas.2115639118 Text en Copyright © 2022 the Author(s). Published by PNAS. https://creativecommons.org/licenses/by-nc-nd/4.0/This article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND) (https://creativecommons.org/licenses/by-nc-nd/4.0/) . |
spellingShingle | The Earth BioGenome Project: The Launch of a Moonshot for Biology Lawniczak, Mara K. N. Durbin, Richard Flicek, Paul Lindblad-Toh, Kerstin Wei, Xiaofeng Archibald, John M. Baker, William J. Belov, Katherine Blaxter, Mark L. Marques Bonet, Tomas Childers, Anna K. Coddington, Jonathan A. Crandall, Keith A. Crawford, Andrew J. Davey, Robert P. Di Palma, Federica Fang, Qi Haerty, Wilfried Hall, Neil Hoff, Katharina J. Howe, Kerstin Jarvis, Erich D. Johnson, Warren E. Johnson, Rebecca N. Kersey, Paul J. Liu, Xin Lopez, Jose Victor Myers, Eugene W. Pettersson, Olga Vinnere Phillippy, Adam M. Poelchau, Monica F. Pruitt, Kim D. Rhie, Arang Castilla-Rubio, Juan Carlos Sahu, Sunil Kumar Salmon, Nicholas A. Soltis, Pamela S. Swarbreck, David Thibaud-Nissen, Françoise Wang, Sibo Wegrzyn, Jill L. Zhang, Guojie Zhang, He Lewin, Harris A. Richards, Stephen Standards recommendations for the Earth BioGenome Project |
title | Standards recommendations for the Earth BioGenome Project |
title_full | Standards recommendations for the Earth BioGenome Project |
title_fullStr | Standards recommendations for the Earth BioGenome Project |
title_full_unstemmed | Standards recommendations for the Earth BioGenome Project |
title_short | Standards recommendations for the Earth BioGenome Project |
title_sort | standards recommendations for the earth biogenome project |
topic | The Earth BioGenome Project: The Launch of a Moonshot for Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8795494/ https://www.ncbi.nlm.nih.gov/pubmed/35042802 http://dx.doi.org/10.1073/pnas.2115639118 |
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