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MALDI-TOF mass spectrometry identification of mosquitoes collected in Vietnam
BACKGROUND: Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) is a tool that has revolutionised clinical microbiology and has recently been described as an innovative and effective approach to arthropod identification. METHODS: In this study, mosquitoes were...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8795957/ https://www.ncbi.nlm.nih.gov/pubmed/35090542 http://dx.doi.org/10.1186/s13071-022-05149-2 |
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author | Huynh, Ly Na Diarra, Adama Zan Nguyen, Hong Sang Tran, Long Bien Do, Van Nguyen Ly, Tran Duc Anh Ho, Van Hoang Nguyen, Xuan Quang Parola, Philippe |
author_facet | Huynh, Ly Na Diarra, Adama Zan Nguyen, Hong Sang Tran, Long Bien Do, Van Nguyen Ly, Tran Duc Anh Ho, Van Hoang Nguyen, Xuan Quang Parola, Philippe |
author_sort | Huynh, Ly Na |
collection | PubMed |
description | BACKGROUND: Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) is a tool that has revolutionised clinical microbiology and has recently been described as an innovative and effective approach to arthropod identification. METHODS: In this study, mosquitoes were captured in Vietnam using four different methods (human landing catch, CDC light traps, BG-Sentinel traps, animal-baited net traps). A total of 4215 mosquitoes were captured and morphologically identified as belonging to three genera: Aedes, Anopheles and Culex. We randomly selected 1253 mosquitoes, including 662 specimens of 14 Anopheles species, 200 specimens of two Aedes species and 391 morphologically unidentified Culex specimens, for molecular and MALDI-TOF MS analysis. The DNA from 98 mosquitoes (69 Anopheles specimens, 23 Culex specimens and six Aedes sp. specimens) was subjected to molecular analysis, either to confirm our morphological identification or the MALDI-TOF MS results, as well as to identify the Culex species that were morphologically identified at the genus level and to resolve the discrepancies between the morphological identification and the MALDI-TOF MS identification. RESULTS: High-quality MS spectra were obtained for 1058 of the 1253 specimens (84%), including 192/200 for Aedes, 589/662 for Anopheles and 277/391 for Culex. The blind test showed that 986/997 (99%) of the specimens were correctly identified by MALDI-TOF MS, with log score values ranging from 1.708 to 2.843. Eleven specimens of Culex could not be identified based on morphological features, MALDI-TOF MS or molecular analysis. CONCLUSIONS: This study enabled us to identify several species of mosquitoes from Vietnam using MALDI-TOF MS, and to enrich our database of MALDI-TOF MS reference spectra. GRAPHICAL ABSTRACT: [Image: see text] SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13071-022-05149-2. |
format | Online Article Text |
id | pubmed-8795957 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-87959572022-01-28 MALDI-TOF mass spectrometry identification of mosquitoes collected in Vietnam Huynh, Ly Na Diarra, Adama Zan Nguyen, Hong Sang Tran, Long Bien Do, Van Nguyen Ly, Tran Duc Anh Ho, Van Hoang Nguyen, Xuan Quang Parola, Philippe Parasit Vectors Research BACKGROUND: Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) is a tool that has revolutionised clinical microbiology and has recently been described as an innovative and effective approach to arthropod identification. METHODS: In this study, mosquitoes were captured in Vietnam using four different methods (human landing catch, CDC light traps, BG-Sentinel traps, animal-baited net traps). A total of 4215 mosquitoes were captured and morphologically identified as belonging to three genera: Aedes, Anopheles and Culex. We randomly selected 1253 mosquitoes, including 662 specimens of 14 Anopheles species, 200 specimens of two Aedes species and 391 morphologically unidentified Culex specimens, for molecular and MALDI-TOF MS analysis. The DNA from 98 mosquitoes (69 Anopheles specimens, 23 Culex specimens and six Aedes sp. specimens) was subjected to molecular analysis, either to confirm our morphological identification or the MALDI-TOF MS results, as well as to identify the Culex species that were morphologically identified at the genus level and to resolve the discrepancies between the morphological identification and the MALDI-TOF MS identification. RESULTS: High-quality MS spectra were obtained for 1058 of the 1253 specimens (84%), including 192/200 for Aedes, 589/662 for Anopheles and 277/391 for Culex. The blind test showed that 986/997 (99%) of the specimens were correctly identified by MALDI-TOF MS, with log score values ranging from 1.708 to 2.843. Eleven specimens of Culex could not be identified based on morphological features, MALDI-TOF MS or molecular analysis. CONCLUSIONS: This study enabled us to identify several species of mosquitoes from Vietnam using MALDI-TOF MS, and to enrich our database of MALDI-TOF MS reference spectra. GRAPHICAL ABSTRACT: [Image: see text] SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13071-022-05149-2. BioMed Central 2022-01-28 /pmc/articles/PMC8795957/ /pubmed/35090542 http://dx.doi.org/10.1186/s13071-022-05149-2 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Huynh, Ly Na Diarra, Adama Zan Nguyen, Hong Sang Tran, Long Bien Do, Van Nguyen Ly, Tran Duc Anh Ho, Van Hoang Nguyen, Xuan Quang Parola, Philippe MALDI-TOF mass spectrometry identification of mosquitoes collected in Vietnam |
title | MALDI-TOF mass spectrometry identification of mosquitoes collected in Vietnam |
title_full | MALDI-TOF mass spectrometry identification of mosquitoes collected in Vietnam |
title_fullStr | MALDI-TOF mass spectrometry identification of mosquitoes collected in Vietnam |
title_full_unstemmed | MALDI-TOF mass spectrometry identification of mosquitoes collected in Vietnam |
title_short | MALDI-TOF mass spectrometry identification of mosquitoes collected in Vietnam |
title_sort | maldi-tof mass spectrometry identification of mosquitoes collected in vietnam |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8795957/ https://www.ncbi.nlm.nih.gov/pubmed/35090542 http://dx.doi.org/10.1186/s13071-022-05149-2 |
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