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The first complete plastome of Mimusops coriacea (A. DC.) Miq. (Sapotaceae)

Mimusops coriacea (A. DC.) Miq. (Sapotoideae, Sapotaceae, Ericales) is native to Madagascar and the Comoro Islands. This species is cultivated in many countries around the world and grows on sand in coastal vegetation. Here we sequenced, assembled, and annotated the first complete chloroplast genome...

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Autores principales: Trad, Rafaela Jorge, da Silva, Saura Rodrigues, do Amaral, Maria do Carmo Estanislau
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Sociedade Brasileira de Genética 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8796699/
https://www.ncbi.nlm.nih.gov/pubmed/35098966
http://dx.doi.org/10.1590/1678-4685-GMB-2021-0174
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author Trad, Rafaela Jorge
da Silva, Saura Rodrigues
do Amaral, Maria do Carmo Estanislau
author_facet Trad, Rafaela Jorge
da Silva, Saura Rodrigues
do Amaral, Maria do Carmo Estanislau
author_sort Trad, Rafaela Jorge
collection PubMed
description Mimusops coriacea (A. DC.) Miq. (Sapotoideae, Sapotaceae, Ericales) is native to Madagascar and the Comoro Islands. This species is cultivated in many countries around the world and grows on sand in coastal vegetation. Here we sequenced, assembled, and annotated the first complete chloroplast genome of M. coriacea. The newly assembled chloroplast was analyzed with other available chloroplasts of Sapotaceae. Our results found a general conserved structure. The complete chloroplast genome has 159,689 bp, including 133 genes distributed in four regions: a large single-copy region of 88,887 bp, a small single-copy region of 18,618 bp, and two inverted repeats of 26,092 bp each. Our maximum likelihood phylogenetic tree was generated with 80 protein-coding genes and recovered a monophyletic Sapotaceae sister to a clade formed by Ebenaceae + Primulaceae. In our analysis, Mimusops coriacea clustered with the other eight species of Sapotaceae included in the study.
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spelling pubmed-87966992022-02-09 The first complete plastome of Mimusops coriacea (A. DC.) Miq. (Sapotaceae) Trad, Rafaela Jorge da Silva, Saura Rodrigues do Amaral, Maria do Carmo Estanislau Genet Mol Biol Plant Genetics Mimusops coriacea (A. DC.) Miq. (Sapotoideae, Sapotaceae, Ericales) is native to Madagascar and the Comoro Islands. This species is cultivated in many countries around the world and grows on sand in coastal vegetation. Here we sequenced, assembled, and annotated the first complete chloroplast genome of M. coriacea. The newly assembled chloroplast was analyzed with other available chloroplasts of Sapotaceae. Our results found a general conserved structure. The complete chloroplast genome has 159,689 bp, including 133 genes distributed in four regions: a large single-copy region of 88,887 bp, a small single-copy region of 18,618 bp, and two inverted repeats of 26,092 bp each. Our maximum likelihood phylogenetic tree was generated with 80 protein-coding genes and recovered a monophyletic Sapotaceae sister to a clade formed by Ebenaceae + Primulaceae. In our analysis, Mimusops coriacea clustered with the other eight species of Sapotaceae included in the study. Sociedade Brasileira de Genética 2022-01-24 /pmc/articles/PMC8796699/ /pubmed/35098966 http://dx.doi.org/10.1590/1678-4685-GMB-2021-0174 Text en https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License
spellingShingle Plant Genetics
Trad, Rafaela Jorge
da Silva, Saura Rodrigues
do Amaral, Maria do Carmo Estanislau
The first complete plastome of Mimusops coriacea (A. DC.) Miq. (Sapotaceae)
title The first complete plastome of Mimusops coriacea (A. DC.) Miq. (Sapotaceae)
title_full The first complete plastome of Mimusops coriacea (A. DC.) Miq. (Sapotaceae)
title_fullStr The first complete plastome of Mimusops coriacea (A. DC.) Miq. (Sapotaceae)
title_full_unstemmed The first complete plastome of Mimusops coriacea (A. DC.) Miq. (Sapotaceae)
title_short The first complete plastome of Mimusops coriacea (A. DC.) Miq. (Sapotaceae)
title_sort first complete plastome of mimusops coriacea (a. dc.) miq. (sapotaceae)
topic Plant Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8796699/
https://www.ncbi.nlm.nih.gov/pubmed/35098966
http://dx.doi.org/10.1590/1678-4685-GMB-2021-0174
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