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The first complete plastome of Mimusops coriacea (A. DC.) Miq. (Sapotaceae)
Mimusops coriacea (A. DC.) Miq. (Sapotoideae, Sapotaceae, Ericales) is native to Madagascar and the Comoro Islands. This species is cultivated in many countries around the world and grows on sand in coastal vegetation. Here we sequenced, assembled, and annotated the first complete chloroplast genome...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Sociedade Brasileira de Genética
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8796699/ https://www.ncbi.nlm.nih.gov/pubmed/35098966 http://dx.doi.org/10.1590/1678-4685-GMB-2021-0174 |
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author | Trad, Rafaela Jorge da Silva, Saura Rodrigues do Amaral, Maria do Carmo Estanislau |
author_facet | Trad, Rafaela Jorge da Silva, Saura Rodrigues do Amaral, Maria do Carmo Estanislau |
author_sort | Trad, Rafaela Jorge |
collection | PubMed |
description | Mimusops coriacea (A. DC.) Miq. (Sapotoideae, Sapotaceae, Ericales) is native to Madagascar and the Comoro Islands. This species is cultivated in many countries around the world and grows on sand in coastal vegetation. Here we sequenced, assembled, and annotated the first complete chloroplast genome of M. coriacea. The newly assembled chloroplast was analyzed with other available chloroplasts of Sapotaceae. Our results found a general conserved structure. The complete chloroplast genome has 159,689 bp, including 133 genes distributed in four regions: a large single-copy region of 88,887 bp, a small single-copy region of 18,618 bp, and two inverted repeats of 26,092 bp each. Our maximum likelihood phylogenetic tree was generated with 80 protein-coding genes and recovered a monophyletic Sapotaceae sister to a clade formed by Ebenaceae + Primulaceae. In our analysis, Mimusops coriacea clustered with the other eight species of Sapotaceae included in the study. |
format | Online Article Text |
id | pubmed-8796699 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Sociedade Brasileira de Genética |
record_format | MEDLINE/PubMed |
spelling | pubmed-87966992022-02-09 The first complete plastome of Mimusops coriacea (A. DC.) Miq. (Sapotaceae) Trad, Rafaela Jorge da Silva, Saura Rodrigues do Amaral, Maria do Carmo Estanislau Genet Mol Biol Plant Genetics Mimusops coriacea (A. DC.) Miq. (Sapotoideae, Sapotaceae, Ericales) is native to Madagascar and the Comoro Islands. This species is cultivated in many countries around the world and grows on sand in coastal vegetation. Here we sequenced, assembled, and annotated the first complete chloroplast genome of M. coriacea. The newly assembled chloroplast was analyzed with other available chloroplasts of Sapotaceae. Our results found a general conserved structure. The complete chloroplast genome has 159,689 bp, including 133 genes distributed in four regions: a large single-copy region of 88,887 bp, a small single-copy region of 18,618 bp, and two inverted repeats of 26,092 bp each. Our maximum likelihood phylogenetic tree was generated with 80 protein-coding genes and recovered a monophyletic Sapotaceae sister to a clade formed by Ebenaceae + Primulaceae. In our analysis, Mimusops coriacea clustered with the other eight species of Sapotaceae included in the study. Sociedade Brasileira de Genética 2022-01-24 /pmc/articles/PMC8796699/ /pubmed/35098966 http://dx.doi.org/10.1590/1678-4685-GMB-2021-0174 Text en https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License |
spellingShingle | Plant Genetics Trad, Rafaela Jorge da Silva, Saura Rodrigues do Amaral, Maria do Carmo Estanislau The first complete plastome of Mimusops coriacea (A. DC.) Miq. (Sapotaceae) |
title | The first complete plastome of Mimusops coriacea (A. DC.) Miq. (Sapotaceae) |
title_full | The first complete plastome of Mimusops coriacea (A. DC.) Miq. (Sapotaceae) |
title_fullStr | The first complete plastome of Mimusops coriacea (A. DC.) Miq. (Sapotaceae) |
title_full_unstemmed | The first complete plastome of Mimusops coriacea (A. DC.) Miq. (Sapotaceae) |
title_short | The first complete plastome of Mimusops coriacea (A. DC.) Miq. (Sapotaceae) |
title_sort | first complete plastome of mimusops coriacea (a. dc.) miq. (sapotaceae) |
topic | Plant Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8796699/ https://www.ncbi.nlm.nih.gov/pubmed/35098966 http://dx.doi.org/10.1590/1678-4685-GMB-2021-0174 |
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