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Validation of a deep learning-based image analysis system to diagnose subclinical endometritis in dairy cows

The assessment of polymorphonuclear leukocyte (PMN) proportions (%) of endometrial samples is the hallmark for subclinical endometritis (SCE) diagnosis. Yet, a non-biased, automated diagnostic method for assessing PMN% in endometrial cytology slides has not been validated so far. We aimed to validat...

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Autores principales: Sadeghi, Hafez, Braun, Hannah-Sophie, Panti, Berner, Opsomer, Geert, Bogado Pascottini, Osvaldo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8797203/
https://www.ncbi.nlm.nih.gov/pubmed/35089986
http://dx.doi.org/10.1371/journal.pone.0263409
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author Sadeghi, Hafez
Braun, Hannah-Sophie
Panti, Berner
Opsomer, Geert
Bogado Pascottini, Osvaldo
author_facet Sadeghi, Hafez
Braun, Hannah-Sophie
Panti, Berner
Opsomer, Geert
Bogado Pascottini, Osvaldo
author_sort Sadeghi, Hafez
collection PubMed
description The assessment of polymorphonuclear leukocyte (PMN) proportions (%) of endometrial samples is the hallmark for subclinical endometritis (SCE) diagnosis. Yet, a non-biased, automated diagnostic method for assessing PMN% in endometrial cytology slides has not been validated so far. We aimed to validate a computer vision software based on deep machine learning to quantify the PMN% in endometrial cytology slides. Uterine cytobrush samples were collected from 116 postpartum Holstein cows. After sampling, each cytobrush was rolled onto three different slides. One slide was stained using Diff-Quick, while a second was stained using Naphthol (golden standard to stain PMN). One single observer evaluated the slides twice at different days under light microscopy. The last slide was stained with a fluorescent dye, and the PMN% were assessed twice by using a fluorescence microscope connected to a smartphone. Fluorescent images were analyzed via the Oculyze Monitoring Uterine Health (MUH) system, which uses a deep learning-based algorithm to identify PMN. Substantial intra-method repeatabilities (via Spearman correlation) were found for Diff-Quick, Naphthol, and Oculyze MUH (r = 0.67 to 0.76). The intra-method agreements (via Kappa value) at ≥1% PMN (κ = 0.44 to 0.47) were lower than at >5 (κ = 0.69 to 0.78) or >10% (κ = 0.67 to 0.85) PMN cut-offs. The inter-method repeatabilities (via Lin’s correlation) were also substantial, and values between Diff-Quick and Oculyze MUH, Naphthol and Diff-Quick, and Naphthol and Oculyze MUH were 0.68, 0.69, and 0.77, respectively. The agreements among evaluation methods at ≥1% PMN were weak (κ = 0.06 to 0.28), while it increased at >5 (κ = 0.48 to 0.81) or >10% (κ = 0.50 to 0.65) PMN cut-offs. To conclude, deep learning-based algorithms in endometrial cytology are reliable and useful for simplifying and reducing the diagnosis bias of SCE in dairy cows.
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spelling pubmed-87972032022-01-29 Validation of a deep learning-based image analysis system to diagnose subclinical endometritis in dairy cows Sadeghi, Hafez Braun, Hannah-Sophie Panti, Berner Opsomer, Geert Bogado Pascottini, Osvaldo PLoS One Research Article The assessment of polymorphonuclear leukocyte (PMN) proportions (%) of endometrial samples is the hallmark for subclinical endometritis (SCE) diagnosis. Yet, a non-biased, automated diagnostic method for assessing PMN% in endometrial cytology slides has not been validated so far. We aimed to validate a computer vision software based on deep machine learning to quantify the PMN% in endometrial cytology slides. Uterine cytobrush samples were collected from 116 postpartum Holstein cows. After sampling, each cytobrush was rolled onto three different slides. One slide was stained using Diff-Quick, while a second was stained using Naphthol (golden standard to stain PMN). One single observer evaluated the slides twice at different days under light microscopy. The last slide was stained with a fluorescent dye, and the PMN% were assessed twice by using a fluorescence microscope connected to a smartphone. Fluorescent images were analyzed via the Oculyze Monitoring Uterine Health (MUH) system, which uses a deep learning-based algorithm to identify PMN. Substantial intra-method repeatabilities (via Spearman correlation) were found for Diff-Quick, Naphthol, and Oculyze MUH (r = 0.67 to 0.76). The intra-method agreements (via Kappa value) at ≥1% PMN (κ = 0.44 to 0.47) were lower than at >5 (κ = 0.69 to 0.78) or >10% (κ = 0.67 to 0.85) PMN cut-offs. The inter-method repeatabilities (via Lin’s correlation) were also substantial, and values between Diff-Quick and Oculyze MUH, Naphthol and Diff-Quick, and Naphthol and Oculyze MUH were 0.68, 0.69, and 0.77, respectively. The agreements among evaluation methods at ≥1% PMN were weak (κ = 0.06 to 0.28), while it increased at >5 (κ = 0.48 to 0.81) or >10% (κ = 0.50 to 0.65) PMN cut-offs. To conclude, deep learning-based algorithms in endometrial cytology are reliable and useful for simplifying and reducing the diagnosis bias of SCE in dairy cows. Public Library of Science 2022-01-28 /pmc/articles/PMC8797203/ /pubmed/35089986 http://dx.doi.org/10.1371/journal.pone.0263409 Text en © 2022 Sadeghi et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Sadeghi, Hafez
Braun, Hannah-Sophie
Panti, Berner
Opsomer, Geert
Bogado Pascottini, Osvaldo
Validation of a deep learning-based image analysis system to diagnose subclinical endometritis in dairy cows
title Validation of a deep learning-based image analysis system to diagnose subclinical endometritis in dairy cows
title_full Validation of a deep learning-based image analysis system to diagnose subclinical endometritis in dairy cows
title_fullStr Validation of a deep learning-based image analysis system to diagnose subclinical endometritis in dairy cows
title_full_unstemmed Validation of a deep learning-based image analysis system to diagnose subclinical endometritis in dairy cows
title_short Validation of a deep learning-based image analysis system to diagnose subclinical endometritis in dairy cows
title_sort validation of a deep learning-based image analysis system to diagnose subclinical endometritis in dairy cows
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8797203/
https://www.ncbi.nlm.nih.gov/pubmed/35089986
http://dx.doi.org/10.1371/journal.pone.0263409
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