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A pan-cancer analysis of the oncogenic role of Keratin 17 (KRT17) in human tumors
BACKGROUND: Although new evidence from cells or animals suggests a relationship between Keratin 17 (KRT17) and cancer, no pan-cancer analysis is currently available. METHODS: The expression level of KRT17 in generalized carcinoma was detected by the Tumor Immune Estimation Resource, version 2 (TIMER...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
AME Publishing Company
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8797707/ https://www.ncbi.nlm.nih.gov/pubmed/35116305 http://dx.doi.org/10.21037/tcr-21-2118 |
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author | Li, Chenchen Teng, Yue Wu, Jiacheng Yan, Fei Deng, Rong Zhu, Ying Li, Xiaoyou |
author_facet | Li, Chenchen Teng, Yue Wu, Jiacheng Yan, Fei Deng, Rong Zhu, Ying Li, Xiaoyou |
author_sort | Li, Chenchen |
collection | PubMed |
description | BACKGROUND: Although new evidence from cells or animals suggests a relationship between Keratin 17 (KRT17) and cancer, no pan-cancer analysis is currently available. METHODS: The expression level of KRT17 in generalized carcinoma was detected by the Tumor Immune Estimation Resource, version 2 (TIMER2) database, and then verified the protein expression of KRT17 in different cancer species in UALCAN database, and analyzed the relationship between the expression level of KRT17 and the clinical stage and survival of different cancers. We further explored the genetic variation of KRT17 in different tumor types included in The Cancer Genome Atlas (TCGA) and the specific mutations in each domain. The changes of KRT17 protein phosphorylation levels and protein expression levels at different phosphorylation sites in different tumors were explored. TIMER2 database was used to explore the potential relationship between the infiltration level of different immune cells and KRT17 gene expression in different TCGA cancer types. Finally, the protein binding to KRT17 and genes related to KRT17 expression were explored by STRING database and TCGA database. RESULTS: KRT17 is overexpressed in most malignancies, and we observed a distinct relationship between KRT17 expression and tumor patient prognosis. Enhanced phosphorylation levels of S13, S24, S32, and S39 were observed in several tumors, such as lung adenocarcinoma (LUAD), colon and ovarian cancers, and uterine corpus endometrial carcinoma (UCEC). Intermediate filament cytoskeleton and keratinization may be simultaneously acting with KRT17 on tumor pathogenesis. CONCLUSIONS: Our pan-cancer analysis provides relatively complete information on the oncogenic functions of KRT17 in various cancers. |
format | Online Article Text |
id | pubmed-8797707 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | AME Publishing Company |
record_format | MEDLINE/PubMed |
spelling | pubmed-87977072022-02-02 A pan-cancer analysis of the oncogenic role of Keratin 17 (KRT17) in human tumors Li, Chenchen Teng, Yue Wu, Jiacheng Yan, Fei Deng, Rong Zhu, Ying Li, Xiaoyou Transl Cancer Res Original Article BACKGROUND: Although new evidence from cells or animals suggests a relationship between Keratin 17 (KRT17) and cancer, no pan-cancer analysis is currently available. METHODS: The expression level of KRT17 in generalized carcinoma was detected by the Tumor Immune Estimation Resource, version 2 (TIMER2) database, and then verified the protein expression of KRT17 in different cancer species in UALCAN database, and analyzed the relationship between the expression level of KRT17 and the clinical stage and survival of different cancers. We further explored the genetic variation of KRT17 in different tumor types included in The Cancer Genome Atlas (TCGA) and the specific mutations in each domain. The changes of KRT17 protein phosphorylation levels and protein expression levels at different phosphorylation sites in different tumors were explored. TIMER2 database was used to explore the potential relationship between the infiltration level of different immune cells and KRT17 gene expression in different TCGA cancer types. Finally, the protein binding to KRT17 and genes related to KRT17 expression were explored by STRING database and TCGA database. RESULTS: KRT17 is overexpressed in most malignancies, and we observed a distinct relationship between KRT17 expression and tumor patient prognosis. Enhanced phosphorylation levels of S13, S24, S32, and S39 were observed in several tumors, such as lung adenocarcinoma (LUAD), colon and ovarian cancers, and uterine corpus endometrial carcinoma (UCEC). Intermediate filament cytoskeleton and keratinization may be simultaneously acting with KRT17 on tumor pathogenesis. CONCLUSIONS: Our pan-cancer analysis provides relatively complete information on the oncogenic functions of KRT17 in various cancers. AME Publishing Company 2021-10 /pmc/articles/PMC8797707/ /pubmed/35116305 http://dx.doi.org/10.21037/tcr-21-2118 Text en 2021 Translational Cancer Research. All rights reserved. https://creativecommons.org/licenses/by-nc-nd/4.0/Open Access Statement: This is an Open Access article distributed in accordance with the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License (CC BY-NC-ND 4.0), which permits the non-commercial replication and distribution of the article with the strict proviso that no changes or edits are made and the original work is properly cited (including links to both the formal publication through the relevant DOI and the license). See: https://creativecommons.org/licenses/by-nc-nd/4.0/. |
spellingShingle | Original Article Li, Chenchen Teng, Yue Wu, Jiacheng Yan, Fei Deng, Rong Zhu, Ying Li, Xiaoyou A pan-cancer analysis of the oncogenic role of Keratin 17 (KRT17) in human tumors |
title | A pan-cancer analysis of the oncogenic role of Keratin 17 (KRT17) in human tumors |
title_full | A pan-cancer analysis of the oncogenic role of Keratin 17 (KRT17) in human tumors |
title_fullStr | A pan-cancer analysis of the oncogenic role of Keratin 17 (KRT17) in human tumors |
title_full_unstemmed | A pan-cancer analysis of the oncogenic role of Keratin 17 (KRT17) in human tumors |
title_short | A pan-cancer analysis of the oncogenic role of Keratin 17 (KRT17) in human tumors |
title_sort | pan-cancer analysis of the oncogenic role of keratin 17 (krt17) in human tumors |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8797707/ https://www.ncbi.nlm.nih.gov/pubmed/35116305 http://dx.doi.org/10.21037/tcr-21-2118 |
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