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Pan-cancer analysis reveals the roles of XPO1 in predicting prognosis and tumorigenesis
BACKGROUND: Exportin 1 (XPO1), a nuclear export protein, participates in many biological processes, including mRNA transport, nucleocytoplasmic transport, nuclear protein export, regulation of mRNA stability, and drug response. XPO1 plays key roles in many cancer types and may serve as a potential b...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
AME Publishing Company
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8797940/ https://www.ncbi.nlm.nih.gov/pubmed/35116322 http://dx.doi.org/10.21037/tcr-21-1646 |
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author | Zhao, Lei Luo, Baiwei Wang, Liang Chen, Wei Jiang, Manyu Zhang, Nengwei |
author_facet | Zhao, Lei Luo, Baiwei Wang, Liang Chen, Wei Jiang, Manyu Zhang, Nengwei |
author_sort | Zhao, Lei |
collection | PubMed |
description | BACKGROUND: Exportin 1 (XPO1), a nuclear export protein, participates in many biological processes, including mRNA transport, nucleocytoplasmic transport, nuclear protein export, regulation of mRNA stability, and drug response. XPO1 plays key roles in many cancer types and may serve as a potential biomarker. It is significant to systematically elucidate the roles of XPO1 in various cancer types in terms of function, molecular biology, immunology, and clinical relevance. METHODS: Data from UCSC Xena, CCLE, and CBioPortal were analyzed for the investigation of the differential expression of XPO1 across multiple cancer types. Clinical data were acquired to analyze the influence of XPO1 on the clinical characteristics of patients, such as survival outcome and clinical stage. The roles of XPO1 in the onset and progression of multiple cancers were expounded in terms of genetic changes at the molecular level [including tumor mutational burden (TMB), microsatellite instability (MSI), copy number variation (CNV), methylation, and gene co-expression], biological pathway changes, and the immune microenvironment. RESULTS: XPO1 was overexpressed in various tumor types, which may be related to CNV. Clinical data analysis revealed that XPO1 may serve as a risk factor in tumors, such as adrenocortical carcinoma, liver hepatocellular carcinoma, and low-grade glioma, thereby affecting patient prognosis. XPO1 in multiple tumor types was also substantially correlated with clinical stage, patient gender, and patient age. In certain tumors, the expression level of XPO1 exerted a greater influence on TMB and MSI. It was also found that XPO1 inhibited the activity of immune cells in the tumor immune microenvironment, such as CD8+ T cells, and affected biological pathways, such as the cell cycle and oxidative phosphorylation, and drove the expression of cancer driver genes, immune checkpoint genes, and highly mutated genes. CONCLUSIONS: XPO1 is a potential pan-cancer risk factor as it may jointly promote tumor onset and progression by inhibiting the immune response, influencing relevant biological pathways, and promoting mutations in other genes. |
format | Online Article Text |
id | pubmed-8797940 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | AME Publishing Company |
record_format | MEDLINE/PubMed |
spelling | pubmed-87979402022-02-02 Pan-cancer analysis reveals the roles of XPO1 in predicting prognosis and tumorigenesis Zhao, Lei Luo, Baiwei Wang, Liang Chen, Wei Jiang, Manyu Zhang, Nengwei Transl Cancer Res Original Article BACKGROUND: Exportin 1 (XPO1), a nuclear export protein, participates in many biological processes, including mRNA transport, nucleocytoplasmic transport, nuclear protein export, regulation of mRNA stability, and drug response. XPO1 plays key roles in many cancer types and may serve as a potential biomarker. It is significant to systematically elucidate the roles of XPO1 in various cancer types in terms of function, molecular biology, immunology, and clinical relevance. METHODS: Data from UCSC Xena, CCLE, and CBioPortal were analyzed for the investigation of the differential expression of XPO1 across multiple cancer types. Clinical data were acquired to analyze the influence of XPO1 on the clinical characteristics of patients, such as survival outcome and clinical stage. The roles of XPO1 in the onset and progression of multiple cancers were expounded in terms of genetic changes at the molecular level [including tumor mutational burden (TMB), microsatellite instability (MSI), copy number variation (CNV), methylation, and gene co-expression], biological pathway changes, and the immune microenvironment. RESULTS: XPO1 was overexpressed in various tumor types, which may be related to CNV. Clinical data analysis revealed that XPO1 may serve as a risk factor in tumors, such as adrenocortical carcinoma, liver hepatocellular carcinoma, and low-grade glioma, thereby affecting patient prognosis. XPO1 in multiple tumor types was also substantially correlated with clinical stage, patient gender, and patient age. In certain tumors, the expression level of XPO1 exerted a greater influence on TMB and MSI. It was also found that XPO1 inhibited the activity of immune cells in the tumor immune microenvironment, such as CD8+ T cells, and affected biological pathways, such as the cell cycle and oxidative phosphorylation, and drove the expression of cancer driver genes, immune checkpoint genes, and highly mutated genes. CONCLUSIONS: XPO1 is a potential pan-cancer risk factor as it may jointly promote tumor onset and progression by inhibiting the immune response, influencing relevant biological pathways, and promoting mutations in other genes. AME Publishing Company 2021-11 /pmc/articles/PMC8797940/ /pubmed/35116322 http://dx.doi.org/10.21037/tcr-21-1646 Text en 2021 Translational Cancer Research. All rights reserved. https://creativecommons.org/licenses/by-nc-nd/4.0/Open Access Statement: This is an Open Access article distributed in accordance with the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License (CC BY-NC-ND 4.0), which permits the non-commercial replication and distribution of the article with the strict proviso that no changes or edits are made and the original work is properly cited (including links to both the formal publication through the relevant DOI and the license). See: https://creativecommons.org/licenses/by-nc-nd/4.0/. |
spellingShingle | Original Article Zhao, Lei Luo, Baiwei Wang, Liang Chen, Wei Jiang, Manyu Zhang, Nengwei Pan-cancer analysis reveals the roles of XPO1 in predicting prognosis and tumorigenesis |
title | Pan-cancer analysis reveals the roles of XPO1 in predicting prognosis and tumorigenesis |
title_full | Pan-cancer analysis reveals the roles of XPO1 in predicting prognosis and tumorigenesis |
title_fullStr | Pan-cancer analysis reveals the roles of XPO1 in predicting prognosis and tumorigenesis |
title_full_unstemmed | Pan-cancer analysis reveals the roles of XPO1 in predicting prognosis and tumorigenesis |
title_short | Pan-cancer analysis reveals the roles of XPO1 in predicting prognosis and tumorigenesis |
title_sort | pan-cancer analysis reveals the roles of xpo1 in predicting prognosis and tumorigenesis |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8797940/ https://www.ncbi.nlm.nih.gov/pubmed/35116322 http://dx.doi.org/10.21037/tcr-21-1646 |
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