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Expression and regulatory network of miRNAs in head and neck squamous cell carcinoma
BACKGROUND: Head and neck squamous cell carcinoma (HNSCC) has the sixth-highest incidence rate of all malignant tumors. The occurrence and progress of HNSCC are induced by extensive molecular changes, resulting in a poor prognosis. The present study aims to explore how altered microRNAs (miRNAs) and...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
AME Publishing Company
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8797951/ https://www.ncbi.nlm.nih.gov/pubmed/35117825 http://dx.doi.org/10.21037/tcr-20-1145 |
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author | Zhao, Lei Tian, Congzhe Xiao, Erbin Du, Jinduo Liang, Jingwei Chen, Xianghong Chi, Weiwei |
author_facet | Zhao, Lei Tian, Congzhe Xiao, Erbin Du, Jinduo Liang, Jingwei Chen, Xianghong Chi, Weiwei |
author_sort | Zhao, Lei |
collection | PubMed |
description | BACKGROUND: Head and neck squamous cell carcinoma (HNSCC) has the sixth-highest incidence rate of all malignant tumors. The occurrence and progress of HNSCC are induced by extensive molecular changes, resulting in a poor prognosis. The present study aims to explore how altered microRNAs (miRNAs) and their co-expression networks of miRNAs-target mRNAs in HNSCC and to provide references for diagnosis and therapy research. METHODS: The reported miRNAs that were ectopically expressed in HNSCC were partly summarized and classified according to the research outcomes. Next, the target mRNAs of miRNAs were predicted using data from online databases. Following that, the co-expression networks between miRNAs and target mRNAs were constructed using Cytoscape. Next, a series of functional enrichment analyses were completed using online databases. RESULTS: A total of 132 miRNAs were summarized using data retrieved from the published literature and then were classified into three grades: A [92], B [18], C [22], according to the research content. Based on these grades, the target mRNAs of the miRNAs in each grade were predicted through data from online databases, and the co-expression networks were constructed separately. Functional enrichment analyses showed that miRNAs participated in multiple molecular functions, biological processes, and signaling pathways. The PI3K-Akt, MAPK, and Wnt signaling pathways, were determined to be regulatory pathways of epithelial-mesenchymal transition (EMT), for instance. CONCLUSIONS: A total of 132 altered miRNAs took part in the regulation of the PI3K-Akt, MAPK, Wnt signaling pathways, and other significant pathways or functions. The present study suggests that miRNAs might be key biomarkers for the diagnosis and therapy of HSNCC. |
format | Online Article Text |
id | pubmed-8797951 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | AME Publishing Company |
record_format | MEDLINE/PubMed |
spelling | pubmed-87979512022-02-02 Expression and regulatory network of miRNAs in head and neck squamous cell carcinoma Zhao, Lei Tian, Congzhe Xiao, Erbin Du, Jinduo Liang, Jingwei Chen, Xianghong Chi, Weiwei Transl Cancer Res Original Article BACKGROUND: Head and neck squamous cell carcinoma (HNSCC) has the sixth-highest incidence rate of all malignant tumors. The occurrence and progress of HNSCC are induced by extensive molecular changes, resulting in a poor prognosis. The present study aims to explore how altered microRNAs (miRNAs) and their co-expression networks of miRNAs-target mRNAs in HNSCC and to provide references for diagnosis and therapy research. METHODS: The reported miRNAs that were ectopically expressed in HNSCC were partly summarized and classified according to the research outcomes. Next, the target mRNAs of miRNAs were predicted using data from online databases. Following that, the co-expression networks between miRNAs and target mRNAs were constructed using Cytoscape. Next, a series of functional enrichment analyses were completed using online databases. RESULTS: A total of 132 miRNAs were summarized using data retrieved from the published literature and then were classified into three grades: A [92], B [18], C [22], according to the research content. Based on these grades, the target mRNAs of the miRNAs in each grade were predicted through data from online databases, and the co-expression networks were constructed separately. Functional enrichment analyses showed that miRNAs participated in multiple molecular functions, biological processes, and signaling pathways. The PI3K-Akt, MAPK, and Wnt signaling pathways, were determined to be regulatory pathways of epithelial-mesenchymal transition (EMT), for instance. CONCLUSIONS: A total of 132 altered miRNAs took part in the regulation of the PI3K-Akt, MAPK, Wnt signaling pathways, and other significant pathways or functions. The present study suggests that miRNAs might be key biomarkers for the diagnosis and therapy of HSNCC. AME Publishing Company 2020-08 /pmc/articles/PMC8797951/ /pubmed/35117825 http://dx.doi.org/10.21037/tcr-20-1145 Text en 2020 Translational Cancer Research. All rights reserved. https://creativecommons.org/licenses/by-nc-nd/4.0/Open Access Statement: This is an Open Access article distributed in accordance with the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License (CC BY-NC-ND 4.0), which permits the non-commercial replication and distribution of the article with the strict proviso that no changes or edits are made and the original work is properly cited (including links to both the formal publication through the relevant DOI and the license). See: https://creativecommons.org/licenses/by-nc-nd/4.0/. |
spellingShingle | Original Article Zhao, Lei Tian, Congzhe Xiao, Erbin Du, Jinduo Liang, Jingwei Chen, Xianghong Chi, Weiwei Expression and regulatory network of miRNAs in head and neck squamous cell carcinoma |
title | Expression and regulatory network of miRNAs in head and neck squamous cell carcinoma |
title_full | Expression and regulatory network of miRNAs in head and neck squamous cell carcinoma |
title_fullStr | Expression and regulatory network of miRNAs in head and neck squamous cell carcinoma |
title_full_unstemmed | Expression and regulatory network of miRNAs in head and neck squamous cell carcinoma |
title_short | Expression and regulatory network of miRNAs in head and neck squamous cell carcinoma |
title_sort | expression and regulatory network of mirnas in head and neck squamous cell carcinoma |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8797951/ https://www.ncbi.nlm.nih.gov/pubmed/35117825 http://dx.doi.org/10.21037/tcr-20-1145 |
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