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Sideroflexin1 as a novel tumor marker independently predicts survival in lung adenocarcinoma

BACKGROUND: Targeted therapy for lung cancers is based on prognostic genes and needs more investigation. No study has yet evaluated the effects of Sideroflexin1 (SFXN1) on lung cancer. METHODS: Data were analyzed from large patient cohorts in the Cancer Genome Atlas (TCGA) and the Gene Expression Om...

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Autores principales: Chen, Qijiu, Wang, Rong, Zhang, Jianyong, Zhou, Liang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: AME Publishing Company 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8798550/
https://www.ncbi.nlm.nih.gov/pubmed/35116859
http://dx.doi.org/10.21037/tcr.2019.06.34
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author Chen, Qijiu
Wang, Rong
Zhang, Jianyong
Zhou, Liang
author_facet Chen, Qijiu
Wang, Rong
Zhang, Jianyong
Zhou, Liang
author_sort Chen, Qijiu
collection PubMed
description BACKGROUND: Targeted therapy for lung cancers is based on prognostic genes and needs more investigation. No study has yet evaluated the effects of Sideroflexin1 (SFXN1) on lung cancer. METHODS: Data were analyzed from large patient cohorts in the Cancer Genome Atlas (TCGA) and the Gene Expression Omnibus (GEO). RESULTS: The mRNA and protein expression of SFXN1 is apparently upregulated in lung adenocarcinoma (LUAD) tissues. Among LUAD patients, upregulated SFXN1 mRNA expression can independently predict unfavorable overall survival (OS, P=0.006) and recurrence-free survival (RFS; P=0.003). In addition, detection data from DNA copy number alterations (CNAs) showed that 164 (32.03%) of the 512 cases had copy number loss (−2 and −1), while 121 (23.63%) of the cases had copy number amplification (+1 and +2). We also found a weak negative correlation between the methylation status of one CpG site (chr5: 174, 944, 791–174, 944, 793) and SFXN1 expression (P<0.0001). CONCLUSIONS: Upregulated SFXN1 mRNA expression can be a prognostic biomarker of unfavorable OS and RFS in patients with LUAD.
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spelling pubmed-87985502022-02-02 Sideroflexin1 as a novel tumor marker independently predicts survival in lung adenocarcinoma Chen, Qijiu Wang, Rong Zhang, Jianyong Zhou, Liang Transl Cancer Res Original Article BACKGROUND: Targeted therapy for lung cancers is based on prognostic genes and needs more investigation. No study has yet evaluated the effects of Sideroflexin1 (SFXN1) on lung cancer. METHODS: Data were analyzed from large patient cohorts in the Cancer Genome Atlas (TCGA) and the Gene Expression Omnibus (GEO). RESULTS: The mRNA and protein expression of SFXN1 is apparently upregulated in lung adenocarcinoma (LUAD) tissues. Among LUAD patients, upregulated SFXN1 mRNA expression can independently predict unfavorable overall survival (OS, P=0.006) and recurrence-free survival (RFS; P=0.003). In addition, detection data from DNA copy number alterations (CNAs) showed that 164 (32.03%) of the 512 cases had copy number loss (−2 and −1), while 121 (23.63%) of the cases had copy number amplification (+1 and +2). We also found a weak negative correlation between the methylation status of one CpG site (chr5: 174, 944, 791–174, 944, 793) and SFXN1 expression (P<0.0001). CONCLUSIONS: Upregulated SFXN1 mRNA expression can be a prognostic biomarker of unfavorable OS and RFS in patients with LUAD. AME Publishing Company 2019-08 /pmc/articles/PMC8798550/ /pubmed/35116859 http://dx.doi.org/10.21037/tcr.2019.06.34 Text en 2019 Translational Cancer Research. All rights reserved. https://creativecommons.org/licenses/by-nc-nd/4.0/Open Access Statement: This is an Open Access article distributed in accordance with the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License (CC BY-NC-ND 4.0), which permits the non-commercial replication and distribution of the article with the strict proviso that no changes or edits are made and the original work is properly cited (including links to both the formal publication through the relevant DOI and the license). See: https://creativecommons.org/licenses/by-nc-nd/4.0/.
spellingShingle Original Article
Chen, Qijiu
Wang, Rong
Zhang, Jianyong
Zhou, Liang
Sideroflexin1 as a novel tumor marker independently predicts survival in lung adenocarcinoma
title Sideroflexin1 as a novel tumor marker independently predicts survival in lung adenocarcinoma
title_full Sideroflexin1 as a novel tumor marker independently predicts survival in lung adenocarcinoma
title_fullStr Sideroflexin1 as a novel tumor marker independently predicts survival in lung adenocarcinoma
title_full_unstemmed Sideroflexin1 as a novel tumor marker independently predicts survival in lung adenocarcinoma
title_short Sideroflexin1 as a novel tumor marker independently predicts survival in lung adenocarcinoma
title_sort sideroflexin1 as a novel tumor marker independently predicts survival in lung adenocarcinoma
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8798550/
https://www.ncbi.nlm.nih.gov/pubmed/35116859
http://dx.doi.org/10.21037/tcr.2019.06.34
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