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Sideroflexin1 as a novel tumor marker independently predicts survival in lung adenocarcinoma
BACKGROUND: Targeted therapy for lung cancers is based on prognostic genes and needs more investigation. No study has yet evaluated the effects of Sideroflexin1 (SFXN1) on lung cancer. METHODS: Data were analyzed from large patient cohorts in the Cancer Genome Atlas (TCGA) and the Gene Expression Om...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
AME Publishing Company
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8798550/ https://www.ncbi.nlm.nih.gov/pubmed/35116859 http://dx.doi.org/10.21037/tcr.2019.06.34 |
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author | Chen, Qijiu Wang, Rong Zhang, Jianyong Zhou, Liang |
author_facet | Chen, Qijiu Wang, Rong Zhang, Jianyong Zhou, Liang |
author_sort | Chen, Qijiu |
collection | PubMed |
description | BACKGROUND: Targeted therapy for lung cancers is based on prognostic genes and needs more investigation. No study has yet evaluated the effects of Sideroflexin1 (SFXN1) on lung cancer. METHODS: Data were analyzed from large patient cohorts in the Cancer Genome Atlas (TCGA) and the Gene Expression Omnibus (GEO). RESULTS: The mRNA and protein expression of SFXN1 is apparently upregulated in lung adenocarcinoma (LUAD) tissues. Among LUAD patients, upregulated SFXN1 mRNA expression can independently predict unfavorable overall survival (OS, P=0.006) and recurrence-free survival (RFS; P=0.003). In addition, detection data from DNA copy number alterations (CNAs) showed that 164 (32.03%) of the 512 cases had copy number loss (−2 and −1), while 121 (23.63%) of the cases had copy number amplification (+1 and +2). We also found a weak negative correlation between the methylation status of one CpG site (chr5: 174, 944, 791–174, 944, 793) and SFXN1 expression (P<0.0001). CONCLUSIONS: Upregulated SFXN1 mRNA expression can be a prognostic biomarker of unfavorable OS and RFS in patients with LUAD. |
format | Online Article Text |
id | pubmed-8798550 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | AME Publishing Company |
record_format | MEDLINE/PubMed |
spelling | pubmed-87985502022-02-02 Sideroflexin1 as a novel tumor marker independently predicts survival in lung adenocarcinoma Chen, Qijiu Wang, Rong Zhang, Jianyong Zhou, Liang Transl Cancer Res Original Article BACKGROUND: Targeted therapy for lung cancers is based on prognostic genes and needs more investigation. No study has yet evaluated the effects of Sideroflexin1 (SFXN1) on lung cancer. METHODS: Data were analyzed from large patient cohorts in the Cancer Genome Atlas (TCGA) and the Gene Expression Omnibus (GEO). RESULTS: The mRNA and protein expression of SFXN1 is apparently upregulated in lung adenocarcinoma (LUAD) tissues. Among LUAD patients, upregulated SFXN1 mRNA expression can independently predict unfavorable overall survival (OS, P=0.006) and recurrence-free survival (RFS; P=0.003). In addition, detection data from DNA copy number alterations (CNAs) showed that 164 (32.03%) of the 512 cases had copy number loss (−2 and −1), while 121 (23.63%) of the cases had copy number amplification (+1 and +2). We also found a weak negative correlation between the methylation status of one CpG site (chr5: 174, 944, 791–174, 944, 793) and SFXN1 expression (P<0.0001). CONCLUSIONS: Upregulated SFXN1 mRNA expression can be a prognostic biomarker of unfavorable OS and RFS in patients with LUAD. AME Publishing Company 2019-08 /pmc/articles/PMC8798550/ /pubmed/35116859 http://dx.doi.org/10.21037/tcr.2019.06.34 Text en 2019 Translational Cancer Research. All rights reserved. https://creativecommons.org/licenses/by-nc-nd/4.0/Open Access Statement: This is an Open Access article distributed in accordance with the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License (CC BY-NC-ND 4.0), which permits the non-commercial replication and distribution of the article with the strict proviso that no changes or edits are made and the original work is properly cited (including links to both the formal publication through the relevant DOI and the license). See: https://creativecommons.org/licenses/by-nc-nd/4.0/. |
spellingShingle | Original Article Chen, Qijiu Wang, Rong Zhang, Jianyong Zhou, Liang Sideroflexin1 as a novel tumor marker independently predicts survival in lung adenocarcinoma |
title | Sideroflexin1 as a novel tumor marker independently predicts survival in lung adenocarcinoma |
title_full | Sideroflexin1 as a novel tumor marker independently predicts survival in lung adenocarcinoma |
title_fullStr | Sideroflexin1 as a novel tumor marker independently predicts survival in lung adenocarcinoma |
title_full_unstemmed | Sideroflexin1 as a novel tumor marker independently predicts survival in lung adenocarcinoma |
title_short | Sideroflexin1 as a novel tumor marker independently predicts survival in lung adenocarcinoma |
title_sort | sideroflexin1 as a novel tumor marker independently predicts survival in lung adenocarcinoma |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8798550/ https://www.ncbi.nlm.nih.gov/pubmed/35116859 http://dx.doi.org/10.21037/tcr.2019.06.34 |
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