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Associations between polymorphisms in genes of base excision repair pathway and lung cancer risk

BACKGROUND: The correlation between at-risk polymorphisms in genes of base excision repair (BER) pathways and lung cancer (LC) risk was newly considered but still not clear, a systematic review and updated meta-analysis was performed in the current study. METHODS: We identified and recorded the elig...

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Autores principales: Liu, Shiqing, Xiao, Yao, Hu, Chengping, Li, Min
Formato: Online Artículo Texto
Lenguaje:English
Publicado: AME Publishing Company 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8799111/
https://www.ncbi.nlm.nih.gov/pubmed/35117636
http://dx.doi.org/10.21037/tcr.2020.02.44
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author Liu, Shiqing
Xiao, Yao
Hu, Chengping
Li, Min
author_facet Liu, Shiqing
Xiao, Yao
Hu, Chengping
Li, Min
author_sort Liu, Shiqing
collection PubMed
description BACKGROUND: The correlation between at-risk polymorphisms in genes of base excision repair (BER) pathways and lung cancer (LC) risk was newly considered but still not clear, a systematic review and updated meta-analysis was performed in the current study. METHODS: We identified and recorded the eligible publications from Google Scholar, PubMed, Medicine and Web of Science. For all calculates, odds ratios (ORs) and 95% confidence intervals (CIs) were applied to estimate the potential relationship between these genetic variants and LC risk. Subsequently, Begg’s funnel plot and Egger’s test were used to appraising the publication bias. RESULTS: A total of 202 case-control studies extracted from 116 publications were enrolled. Firstly, we analyzed six polymorphisms in XRCC1, the overall analysis results of homozygote and recessive models illustrated that rs3213245 polymorphism was remarkably linked to an upgrade LC risk. Then, in the subgroup analysis stratified by ethnicity, we uncovered a meaningfully raised risk of LC in Asian population in homozygote and recessive models for rs3213245 polymorphism, as well as in the allelic contrast, heterozygous and dominant models for rs915927 polymorphism. For APEX1-rs1760944 polymorphism, the overall analysis suggested a significantly decreased risk. Another gene was OGG1, we identified a significantly upregulated risk in recessive model of OGG1-rs1052133 polymorphism for LC. CONCLUSIONS: XRCC1-rs3213245 and OGG1-rs1052133 polymorphisms are risk factors for LC, while APEX1-rs1760944 polymorphism is a protective factor.
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spelling pubmed-87991112022-02-02 Associations between polymorphisms in genes of base excision repair pathway and lung cancer risk Liu, Shiqing Xiao, Yao Hu, Chengping Li, Min Transl Cancer Res Original Article BACKGROUND: The correlation between at-risk polymorphisms in genes of base excision repair (BER) pathways and lung cancer (LC) risk was newly considered but still not clear, a systematic review and updated meta-analysis was performed in the current study. METHODS: We identified and recorded the eligible publications from Google Scholar, PubMed, Medicine and Web of Science. For all calculates, odds ratios (ORs) and 95% confidence intervals (CIs) were applied to estimate the potential relationship between these genetic variants and LC risk. Subsequently, Begg’s funnel plot and Egger’s test were used to appraising the publication bias. RESULTS: A total of 202 case-control studies extracted from 116 publications were enrolled. Firstly, we analyzed six polymorphisms in XRCC1, the overall analysis results of homozygote and recessive models illustrated that rs3213245 polymorphism was remarkably linked to an upgrade LC risk. Then, in the subgroup analysis stratified by ethnicity, we uncovered a meaningfully raised risk of LC in Asian population in homozygote and recessive models for rs3213245 polymorphism, as well as in the allelic contrast, heterozygous and dominant models for rs915927 polymorphism. For APEX1-rs1760944 polymorphism, the overall analysis suggested a significantly decreased risk. Another gene was OGG1, we identified a significantly upregulated risk in recessive model of OGG1-rs1052133 polymorphism for LC. CONCLUSIONS: XRCC1-rs3213245 and OGG1-rs1052133 polymorphisms are risk factors for LC, while APEX1-rs1760944 polymorphism is a protective factor. AME Publishing Company 2020-04 /pmc/articles/PMC8799111/ /pubmed/35117636 http://dx.doi.org/10.21037/tcr.2020.02.44 Text en 2020 Translational Cancer Research. All rights reserved. https://creativecommons.org/licenses/by-nc-nd/4.0/Open Access Statement: This is an Open Access article distributed in accordance with the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License (CC BY-NC-ND 4.0), which permits the non-commercial replication and distribution of the article with the strict proviso that no changes or edits are made and the original work is properly cited (including links to both the formal publication through the relevant DOI and the license). See: https://creativecommons.org/licenses/by-nc-nd/4.0/.
spellingShingle Original Article
Liu, Shiqing
Xiao, Yao
Hu, Chengping
Li, Min
Associations between polymorphisms in genes of base excision repair pathway and lung cancer risk
title Associations between polymorphisms in genes of base excision repair pathway and lung cancer risk
title_full Associations between polymorphisms in genes of base excision repair pathway and lung cancer risk
title_fullStr Associations between polymorphisms in genes of base excision repair pathway and lung cancer risk
title_full_unstemmed Associations between polymorphisms in genes of base excision repair pathway and lung cancer risk
title_short Associations between polymorphisms in genes of base excision repair pathway and lung cancer risk
title_sort associations between polymorphisms in genes of base excision repair pathway and lung cancer risk
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8799111/
https://www.ncbi.nlm.nih.gov/pubmed/35117636
http://dx.doi.org/10.21037/tcr.2020.02.44
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