Cargando…
High expression of TXNDC11 indicated unfavorable prognosis of glioma
BACKGROUND: Thioredoxin domain containing 11 (TXNDC11) has been implicated in numerous cancers. Nevertheless, the function of TXNDC11 in glioma is not well described. This study aimed to assess clinical significance of TXNDC11 in glioma based on bioinformatics analysis and immunohistochemical (IHC)...
Autores principales: | , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
AME Publishing Company
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8799221/ https://www.ncbi.nlm.nih.gov/pubmed/35116356 http://dx.doi.org/10.21037/tcr-21-1326 |
_version_ | 1784642018458206208 |
---|---|
author | Peng, Peng Cheng, Fangling Dong, Yuting Chen, Zirong Zhang, Xiaolin Guo, Dongsheng Yu, Xingjiang Lu, Yiyang Ke, Yuyong Zhang, Bin He, Ximiao Wan, Feng |
author_facet | Peng, Peng Cheng, Fangling Dong, Yuting Chen, Zirong Zhang, Xiaolin Guo, Dongsheng Yu, Xingjiang Lu, Yiyang Ke, Yuyong Zhang, Bin He, Ximiao Wan, Feng |
author_sort | Peng, Peng |
collection | PubMed |
description | BACKGROUND: Thioredoxin domain containing 11 (TXNDC11) has been implicated in numerous cancers. Nevertheless, the function of TXNDC11 in glioma is not well described. This study aimed to assess clinical significance of TXNDC11 in glioma based on bioinformatics analysis and immunohistochemical (IHC) staining. METHODS: GEPIA2, The Cancer Genome Atlas (TCGA), and Gene Expression Omnibus (GEO) databases were employed to detect the levels of TXNDC11 transcript in glioma. Gene expression profiles and data from the methylation chip with clinical details from TCGA and Chinese Glioma Genome Atlas (CGGA) of glioma samples were examined. The methylation of TXNDC11 in glioma was evaluated by 450K methylation chip data analysis. The pathways involved in TXNDC11 expression were screened by gene set enrichment analysis (GSEA). The correlation between TXNDC11 and immune cells was analyzed. Protein level of TXNDC11 was detected by IHC staining in glioma specimens. RESULTS: TXNDC11 was highly expressed in glioma, and high TXNDC11 expression was associated with poor overall survival (OS) and worse clinical prognostic variables. The methylation of cg04399632 was statistically different between glioma samples and normal samples, and was negatively correlated with TXNDC11 expression in glioma patients. Survival analysis demonstrated a poorer prognosis in glioma patients with cg04399632 hypomethylation. TXNDC11-high phenotype was associated with certain immune-related pathways and other signaling pathways in glioma. The expression of TXNDC11 was correlated positively with M2 macrophage infiltration and negatively with M0 and M1 macrophage infiltration. IHC staining confirmed that TXNDC11 expression increased in higher-grade glioma. CONCLUSIONS: High expression of TXNDC11 may predict unfavorable prognosis of glioma patients. |
format | Online Article Text |
id | pubmed-8799221 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | AME Publishing Company |
record_format | MEDLINE/PubMed |
spelling | pubmed-87992212022-02-02 High expression of TXNDC11 indicated unfavorable prognosis of glioma Peng, Peng Cheng, Fangling Dong, Yuting Chen, Zirong Zhang, Xiaolin Guo, Dongsheng Yu, Xingjiang Lu, Yiyang Ke, Yuyong Zhang, Bin He, Ximiao Wan, Feng Transl Cancer Res Original Article BACKGROUND: Thioredoxin domain containing 11 (TXNDC11) has been implicated in numerous cancers. Nevertheless, the function of TXNDC11 in glioma is not well described. This study aimed to assess clinical significance of TXNDC11 in glioma based on bioinformatics analysis and immunohistochemical (IHC) staining. METHODS: GEPIA2, The Cancer Genome Atlas (TCGA), and Gene Expression Omnibus (GEO) databases were employed to detect the levels of TXNDC11 transcript in glioma. Gene expression profiles and data from the methylation chip with clinical details from TCGA and Chinese Glioma Genome Atlas (CGGA) of glioma samples were examined. The methylation of TXNDC11 in glioma was evaluated by 450K methylation chip data analysis. The pathways involved in TXNDC11 expression were screened by gene set enrichment analysis (GSEA). The correlation between TXNDC11 and immune cells was analyzed. Protein level of TXNDC11 was detected by IHC staining in glioma specimens. RESULTS: TXNDC11 was highly expressed in glioma, and high TXNDC11 expression was associated with poor overall survival (OS) and worse clinical prognostic variables. The methylation of cg04399632 was statistically different between glioma samples and normal samples, and was negatively correlated with TXNDC11 expression in glioma patients. Survival analysis demonstrated a poorer prognosis in glioma patients with cg04399632 hypomethylation. TXNDC11-high phenotype was associated with certain immune-related pathways and other signaling pathways in glioma. The expression of TXNDC11 was correlated positively with M2 macrophage infiltration and negatively with M0 and M1 macrophage infiltration. IHC staining confirmed that TXNDC11 expression increased in higher-grade glioma. CONCLUSIONS: High expression of TXNDC11 may predict unfavorable prognosis of glioma patients. AME Publishing Company 2021-12 /pmc/articles/PMC8799221/ /pubmed/35116356 http://dx.doi.org/10.21037/tcr-21-1326 Text en 2021 Translational Cancer Research. All rights reserved. https://creativecommons.org/licenses/by-nc-nd/4.0/Open Access Statement: This is an Open Access article distributed in accordance with the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License (CC BY-NC-ND 4.0), which permits the non-commercial replication and distribution of the article with the strict proviso that no changes or edits are made and the original work is properly cited (including links to both the formal publication through the relevant DOI and the license). See: https://creativecommons.org/licenses/by-nc-nd/4.0/. |
spellingShingle | Original Article Peng, Peng Cheng, Fangling Dong, Yuting Chen, Zirong Zhang, Xiaolin Guo, Dongsheng Yu, Xingjiang Lu, Yiyang Ke, Yuyong Zhang, Bin He, Ximiao Wan, Feng High expression of TXNDC11 indicated unfavorable prognosis of glioma |
title | High expression of TXNDC11 indicated unfavorable prognosis of glioma |
title_full | High expression of TXNDC11 indicated unfavorable prognosis of glioma |
title_fullStr | High expression of TXNDC11 indicated unfavorable prognosis of glioma |
title_full_unstemmed | High expression of TXNDC11 indicated unfavorable prognosis of glioma |
title_short | High expression of TXNDC11 indicated unfavorable prognosis of glioma |
title_sort | high expression of txndc11 indicated unfavorable prognosis of glioma |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8799221/ https://www.ncbi.nlm.nih.gov/pubmed/35116356 http://dx.doi.org/10.21037/tcr-21-1326 |
work_keys_str_mv | AT pengpeng highexpressionoftxndc11indicatedunfavorableprognosisofglioma AT chengfangling highexpressionoftxndc11indicatedunfavorableprognosisofglioma AT dongyuting highexpressionoftxndc11indicatedunfavorableprognosisofglioma AT chenzirong highexpressionoftxndc11indicatedunfavorableprognosisofglioma AT zhangxiaolin highexpressionoftxndc11indicatedunfavorableprognosisofglioma AT guodongsheng highexpressionoftxndc11indicatedunfavorableprognosisofglioma AT yuxingjiang highexpressionoftxndc11indicatedunfavorableprognosisofglioma AT luyiyang highexpressionoftxndc11indicatedunfavorableprognosisofglioma AT keyuyong highexpressionoftxndc11indicatedunfavorableprognosisofglioma AT zhangbin highexpressionoftxndc11indicatedunfavorableprognosisofglioma AT heximiao highexpressionoftxndc11indicatedunfavorableprognosisofglioma AT wanfeng highexpressionoftxndc11indicatedunfavorableprognosisofglioma |