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Identification of LTF as a Prognostic Biomarker for Osteosarcoma

Osteosarcoma remains a major health problem in teenagers. However, its pathogenesis mechanism remains not fully elucidated. This study aims to identify the prognostic biomarkers for osteosarcoma. In this study, we selected genes with a median absolute deviation (MAD) value of the top 5000 in the GSE...

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Autores principales: Liu, Xiaoqi, Wang, Zengqiang, Liu, Meijiao, Zhi, Fengnan, Wang, Pengpeng, Liu, Xingyu, Yu, Shanxiao, Liu, Bing, Jiang, Yanan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8799371/
https://www.ncbi.nlm.nih.gov/pubmed/35096061
http://dx.doi.org/10.1155/2022/4656661
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author Liu, Xiaoqi
Wang, Zengqiang
Liu, Meijiao
Zhi, Fengnan
Wang, Pengpeng
Liu, Xingyu
Yu, Shanxiao
Liu, Bing
Jiang, Yanan
author_facet Liu, Xiaoqi
Wang, Zengqiang
Liu, Meijiao
Zhi, Fengnan
Wang, Pengpeng
Liu, Xingyu
Yu, Shanxiao
Liu, Bing
Jiang, Yanan
author_sort Liu, Xiaoqi
collection PubMed
description Osteosarcoma remains a major health problem in teenagers. However, its pathogenesis mechanism remains not fully elucidated. This study aims to identify the prognostic biomarkers for osteosarcoma. In this study, we selected genes with a median absolute deviation (MAD) value of the top 5000 in the GSE32981 dataset for subsequent analysis. Weighted correlation network analysis (WGCNA) was used to construct a coexpression network. WGCNA showed that the tan module and midnight blue module were highly correlated with origin and metastases of osteosarcoma, respectively. Enrichment analysis was conducted using genes in the tan module and midnight blue module. A gene coexpression network was constructed by calculating the Spearman correlation coefficients. Four key genes (LTF, C10orf107, HIST1H2AK, and NEXN) were identified to be correlated with the prognosis of osteosarcoma patients. LTF has the highest AUC value, and its effect on osteosarcoma cells was then evaluated. The effect of LTF overexpression on proliferation, migration, and invasion of MG63 and 143B cells was detected by the CCK-8 assay, transwell cell migration assay, and transwell invasion assay, respectively. The overexpression of LTF promoted the proliferation, migration, and invasion of MG63 and 143B cells. In conclusion, LTF may serve as a prognostic biomarker for osteosarcoma.
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spelling pubmed-87993712022-01-29 Identification of LTF as a Prognostic Biomarker for Osteosarcoma Liu, Xiaoqi Wang, Zengqiang Liu, Meijiao Zhi, Fengnan Wang, Pengpeng Liu, Xingyu Yu, Shanxiao Liu, Bing Jiang, Yanan J Oncol Research Article Osteosarcoma remains a major health problem in teenagers. However, its pathogenesis mechanism remains not fully elucidated. This study aims to identify the prognostic biomarkers for osteosarcoma. In this study, we selected genes with a median absolute deviation (MAD) value of the top 5000 in the GSE32981 dataset for subsequent analysis. Weighted correlation network analysis (WGCNA) was used to construct a coexpression network. WGCNA showed that the tan module and midnight blue module were highly correlated with origin and metastases of osteosarcoma, respectively. Enrichment analysis was conducted using genes in the tan module and midnight blue module. A gene coexpression network was constructed by calculating the Spearman correlation coefficients. Four key genes (LTF, C10orf107, HIST1H2AK, and NEXN) were identified to be correlated with the prognosis of osteosarcoma patients. LTF has the highest AUC value, and its effect on osteosarcoma cells was then evaluated. The effect of LTF overexpression on proliferation, migration, and invasion of MG63 and 143B cells was detected by the CCK-8 assay, transwell cell migration assay, and transwell invasion assay, respectively. The overexpression of LTF promoted the proliferation, migration, and invasion of MG63 and 143B cells. In conclusion, LTF may serve as a prognostic biomarker for osteosarcoma. Hindawi 2022-01-21 /pmc/articles/PMC8799371/ /pubmed/35096061 http://dx.doi.org/10.1155/2022/4656661 Text en Copyright © 2022 Xiaoqi Liu et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Liu, Xiaoqi
Wang, Zengqiang
Liu, Meijiao
Zhi, Fengnan
Wang, Pengpeng
Liu, Xingyu
Yu, Shanxiao
Liu, Bing
Jiang, Yanan
Identification of LTF as a Prognostic Biomarker for Osteosarcoma
title Identification of LTF as a Prognostic Biomarker for Osteosarcoma
title_full Identification of LTF as a Prognostic Biomarker for Osteosarcoma
title_fullStr Identification of LTF as a Prognostic Biomarker for Osteosarcoma
title_full_unstemmed Identification of LTF as a Prognostic Biomarker for Osteosarcoma
title_short Identification of LTF as a Prognostic Biomarker for Osteosarcoma
title_sort identification of ltf as a prognostic biomarker for osteosarcoma
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8799371/
https://www.ncbi.nlm.nih.gov/pubmed/35096061
http://dx.doi.org/10.1155/2022/4656661
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