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A complete framework for accurate recognition and prognosis of COVID-19 patients based on deep transfer learning and feature classification approach
The sudden appearance of COVID-19 has put the world in a serious situation. Due to the rapid spread of the virus and the increase in the number of infected patients and deaths, COVID-19 was declared a pandemic. This pandemic has its destructive effect not only on humans but also on the economy. Desp...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Netherlands
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8799451/ https://www.ncbi.nlm.nih.gov/pubmed/35125606 http://dx.doi.org/10.1007/s10462-021-10127-8 |
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author | Balaha, Hossam Magdy El-Gendy, Eman M. Saafan, Mahmoud M. |
author_facet | Balaha, Hossam Magdy El-Gendy, Eman M. Saafan, Mahmoud M. |
author_sort | Balaha, Hossam Magdy |
collection | PubMed |
description | The sudden appearance of COVID-19 has put the world in a serious situation. Due to the rapid spread of the virus and the increase in the number of infected patients and deaths, COVID-19 was declared a pandemic. This pandemic has its destructive effect not only on humans but also on the economy. Despite the development and availability of different vaccines for COVID-19, scientists still warn the citizens of new severe waves of the virus, and as a result, fast diagnosis of COVID-19 is a critical issue. Chest imaging proved to be a powerful tool in the early detection of COVID-19. This study introduces an entire framework for the early detection and early prognosis of COVID-19 severity in the diagnosed patients using laboratory test results. It consists of two phases (1) Early Diagnostic Phase (EDP) and (2) Early Prognostic Phase (EPP). In EDP, COVID-19 patients are diagnosed using CT chest images. In the current study, 5, 159 COVID-19 and 10, 376 normal computed tomography (CT) images of Egyptians were used as a dataset to train 7 different convolutional neural networks using transfer learning. Data augmentation normal techniques and generative adversarial networks (GANs), CycleGAN and CCGAN, were used to increase the images in the dataset to avoid overfitting issues. 28 experiments were applied and multiple performance metrics were captured. Classification with no augmentation yielded [Formula: see text] accuracy by EfficientNetB7 architecture. By applying CycleGAN and CC-GAN Augmentation, the maximum reported accuracies were [Formula: see text] and [Formula: see text] by MobileNetV1 and VGG-16 architectures respectively. In EPP, the prognosis of the severity of COVID-19 in patients is early determined using laboratory test results. In this study, 25 different classification techniques were applied and from the different results, the highest accuracies were [Formula: see text] and [Formula: see text] reported by the Ensemble Bagged Trees and Tree (Fine, Medium, and Coarse) techniques respectively. |
format | Online Article Text |
id | pubmed-8799451 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer Netherlands |
record_format | MEDLINE/PubMed |
spelling | pubmed-87994512022-01-31 A complete framework for accurate recognition and prognosis of COVID-19 patients based on deep transfer learning and feature classification approach Balaha, Hossam Magdy El-Gendy, Eman M. Saafan, Mahmoud M. Artif Intell Rev Article The sudden appearance of COVID-19 has put the world in a serious situation. Due to the rapid spread of the virus and the increase in the number of infected patients and deaths, COVID-19 was declared a pandemic. This pandemic has its destructive effect not only on humans but also on the economy. Despite the development and availability of different vaccines for COVID-19, scientists still warn the citizens of new severe waves of the virus, and as a result, fast diagnosis of COVID-19 is a critical issue. Chest imaging proved to be a powerful tool in the early detection of COVID-19. This study introduces an entire framework for the early detection and early prognosis of COVID-19 severity in the diagnosed patients using laboratory test results. It consists of two phases (1) Early Diagnostic Phase (EDP) and (2) Early Prognostic Phase (EPP). In EDP, COVID-19 patients are diagnosed using CT chest images. In the current study, 5, 159 COVID-19 and 10, 376 normal computed tomography (CT) images of Egyptians were used as a dataset to train 7 different convolutional neural networks using transfer learning. Data augmentation normal techniques and generative adversarial networks (GANs), CycleGAN and CCGAN, were used to increase the images in the dataset to avoid overfitting issues. 28 experiments were applied and multiple performance metrics were captured. Classification with no augmentation yielded [Formula: see text] accuracy by EfficientNetB7 architecture. By applying CycleGAN and CC-GAN Augmentation, the maximum reported accuracies were [Formula: see text] and [Formula: see text] by MobileNetV1 and VGG-16 architectures respectively. In EPP, the prognosis of the severity of COVID-19 in patients is early determined using laboratory test results. In this study, 25 different classification techniques were applied and from the different results, the highest accuracies were [Formula: see text] and [Formula: see text] reported by the Ensemble Bagged Trees and Tree (Fine, Medium, and Coarse) techniques respectively. Springer Netherlands 2022-01-29 2022 /pmc/articles/PMC8799451/ /pubmed/35125606 http://dx.doi.org/10.1007/s10462-021-10127-8 Text en © The Author(s), under exclusive licence to Springer Nature B.V. 2021 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic. |
spellingShingle | Article Balaha, Hossam Magdy El-Gendy, Eman M. Saafan, Mahmoud M. A complete framework for accurate recognition and prognosis of COVID-19 patients based on deep transfer learning and feature classification approach |
title | A complete framework for accurate recognition and prognosis of COVID-19 patients based on deep transfer learning and feature classification approach |
title_full | A complete framework for accurate recognition and prognosis of COVID-19 patients based on deep transfer learning and feature classification approach |
title_fullStr | A complete framework for accurate recognition and prognosis of COVID-19 patients based on deep transfer learning and feature classification approach |
title_full_unstemmed | A complete framework for accurate recognition and prognosis of COVID-19 patients based on deep transfer learning and feature classification approach |
title_short | A complete framework for accurate recognition and prognosis of COVID-19 patients based on deep transfer learning and feature classification approach |
title_sort | complete framework for accurate recognition and prognosis of covid-19 patients based on deep transfer learning and feature classification approach |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8799451/ https://www.ncbi.nlm.nih.gov/pubmed/35125606 http://dx.doi.org/10.1007/s10462-021-10127-8 |
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