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Using deep learning models to analyze the cerebral edema complication caused by radiotherapy in patients with intracranial tumor
Using deep learning models to analyze patients with intracranial tumors, to study the image segmentation and standard results by clinical depiction complications of cerebral edema after receiving radiotherapy. In this study, patients with intracranial tumors receiving computer knife (CyberKnife M6)...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8799730/ https://www.ncbi.nlm.nih.gov/pubmed/35091636 http://dx.doi.org/10.1038/s41598-022-05455-w |
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author | Chao, Pei-Ju Chang, Liyun Kang, Chen-Lin Lin, Chin-Hsueh Shieh, Chin-Shiuh Wu, Jia-Ming Tseng, Chin-Dar Tsai, I-Hsing Hsu, Hsuan-Chih Huang, Yu-Jie Lee, Tsair-Fwu |
author_facet | Chao, Pei-Ju Chang, Liyun Kang, Chen-Lin Lin, Chin-Hsueh Shieh, Chin-Shiuh Wu, Jia-Ming Tseng, Chin-Dar Tsai, I-Hsing Hsu, Hsuan-Chih Huang, Yu-Jie Lee, Tsair-Fwu |
author_sort | Chao, Pei-Ju |
collection | PubMed |
description | Using deep learning models to analyze patients with intracranial tumors, to study the image segmentation and standard results by clinical depiction complications of cerebral edema after receiving radiotherapy. In this study, patients with intracranial tumors receiving computer knife (CyberKnife M6) stereotactic radiosurgery were followed using the treatment planning system (MultiPlan 5.1.3) to obtain before-treatment and four-month follow-up images of patients. The TensorFlow platform was used as the core architecture for training neural networks. Supervised learning was used to build labels for the cerebral edema dataset by using Mask region-based convolutional neural networks (R-CNN), and region growing algorithms. The three evaluation coefficients DICE, Jaccard (intersection over union, IoU), and volumetric overlap error (VOE) were used to analyze and calculate the algorithms in the image collection for cerebral edema image segmentation and the standard as described by the oncologists. When DICE and IoU indices were 1, and the VOE index was 0, the results were identical to those described by the clinician.The study found using the Mask R-CNN model in the segmentation of cerebral edema, the DICE index was 0.88, the IoU index was 0.79, and the VOE index was 2.0. The DICE, IoU, and VOE indices using region growing were 0.77, 0.64, and 3.2, respectively. Using the evaluated index, the Mask R-CNN model had the best segmentation effect. This method can be implemented in the clinical workflow in the future to achieve good complication segmentation and provide clinical evaluation and guidance suggestions. |
format | Online Article Text |
id | pubmed-8799730 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-87997302022-02-01 Using deep learning models to analyze the cerebral edema complication caused by radiotherapy in patients with intracranial tumor Chao, Pei-Ju Chang, Liyun Kang, Chen-Lin Lin, Chin-Hsueh Shieh, Chin-Shiuh Wu, Jia-Ming Tseng, Chin-Dar Tsai, I-Hsing Hsu, Hsuan-Chih Huang, Yu-Jie Lee, Tsair-Fwu Sci Rep Article Using deep learning models to analyze patients with intracranial tumors, to study the image segmentation and standard results by clinical depiction complications of cerebral edema after receiving radiotherapy. In this study, patients with intracranial tumors receiving computer knife (CyberKnife M6) stereotactic radiosurgery were followed using the treatment planning system (MultiPlan 5.1.3) to obtain before-treatment and four-month follow-up images of patients. The TensorFlow platform was used as the core architecture for training neural networks. Supervised learning was used to build labels for the cerebral edema dataset by using Mask region-based convolutional neural networks (R-CNN), and region growing algorithms. The three evaluation coefficients DICE, Jaccard (intersection over union, IoU), and volumetric overlap error (VOE) were used to analyze and calculate the algorithms in the image collection for cerebral edema image segmentation and the standard as described by the oncologists. When DICE and IoU indices were 1, and the VOE index was 0, the results were identical to those described by the clinician.The study found using the Mask R-CNN model in the segmentation of cerebral edema, the DICE index was 0.88, the IoU index was 0.79, and the VOE index was 2.0. The DICE, IoU, and VOE indices using region growing were 0.77, 0.64, and 3.2, respectively. Using the evaluated index, the Mask R-CNN model had the best segmentation effect. This method can be implemented in the clinical workflow in the future to achieve good complication segmentation and provide clinical evaluation and guidance suggestions. Nature Publishing Group UK 2022-01-28 /pmc/articles/PMC8799730/ /pubmed/35091636 http://dx.doi.org/10.1038/s41598-022-05455-w Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Chao, Pei-Ju Chang, Liyun Kang, Chen-Lin Lin, Chin-Hsueh Shieh, Chin-Shiuh Wu, Jia-Ming Tseng, Chin-Dar Tsai, I-Hsing Hsu, Hsuan-Chih Huang, Yu-Jie Lee, Tsair-Fwu Using deep learning models to analyze the cerebral edema complication caused by radiotherapy in patients with intracranial tumor |
title | Using deep learning models to analyze the cerebral edema complication caused by radiotherapy in patients with intracranial tumor |
title_full | Using deep learning models to analyze the cerebral edema complication caused by radiotherapy in patients with intracranial tumor |
title_fullStr | Using deep learning models to analyze the cerebral edema complication caused by radiotherapy in patients with intracranial tumor |
title_full_unstemmed | Using deep learning models to analyze the cerebral edema complication caused by radiotherapy in patients with intracranial tumor |
title_short | Using deep learning models to analyze the cerebral edema complication caused by radiotherapy in patients with intracranial tumor |
title_sort | using deep learning models to analyze the cerebral edema complication caused by radiotherapy in patients with intracranial tumor |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8799730/ https://www.ncbi.nlm.nih.gov/pubmed/35091636 http://dx.doi.org/10.1038/s41598-022-05455-w |
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