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Molecular mechanisms governing circulating immune cell heterogeneity across different species revealed by single‐cell sequencing

BACKGROUND: Immune cells play important roles in mediating immune response and host defense against invading pathogens. However, insights into the molecular mechanisms governing circulating immune cell diversity among multiple species are limited. METHODS: In this study, we compared the single‐cell...

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Autores principales: Li, Zhibin, Sun, Chengcheng, Wang, Fei, Wang, Xiran, Zhu, Jiacheng, Luo, Lihua, Ding, Xiangning, Zhang, Yanan, Ding, Peiwen, Wang, Haoyu, Pu, Mingyi, Li, Yuejiao, Wang, Shiyou, Qin, Qiuyu, Wei, Yanan, Sun, Jian, Wang, Xiangdong, Luo, Yonglun, Chen, Dongsheng, Qiu, Wei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8800483/
https://www.ncbi.nlm.nih.gov/pubmed/35092700
http://dx.doi.org/10.1002/ctm2.689
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author Li, Zhibin
Sun, Chengcheng
Wang, Fei
Wang, Xiran
Zhu, Jiacheng
Luo, Lihua
Ding, Xiangning
Zhang, Yanan
Ding, Peiwen
Wang, Haoyu
Pu, Mingyi
Li, Yuejiao
Wang, Shiyou
Qin, Qiuyu
Wei, Yanan
Sun, Jian
Wang, Xiangdong
Luo, Yonglun
Chen, Dongsheng
Qiu, Wei
author_facet Li, Zhibin
Sun, Chengcheng
Wang, Fei
Wang, Xiran
Zhu, Jiacheng
Luo, Lihua
Ding, Xiangning
Zhang, Yanan
Ding, Peiwen
Wang, Haoyu
Pu, Mingyi
Li, Yuejiao
Wang, Shiyou
Qin, Qiuyu
Wei, Yanan
Sun, Jian
Wang, Xiangdong
Luo, Yonglun
Chen, Dongsheng
Qiu, Wei
author_sort Li, Zhibin
collection PubMed
description BACKGROUND: Immune cells play important roles in mediating immune response and host defense against invading pathogens. However, insights into the molecular mechanisms governing circulating immune cell diversity among multiple species are limited. METHODS: In this study, we compared the single‐cell transcriptomes of immune cells from 12 species. Distinct molecular profiles were characterized for different immune cell types, including T cells, B cells, natural killer cells, monocytes, and dendritic cells. RESULTS: Our data revealed the heterogeneity and compositions of circulating immune cells among 12 different species. Additionally, we explored the conserved and divergent cellular crosstalks and genetic regulatory networks among vertebrate immune cells. Notably, the ligand and receptor pair VIM‐CD44 was highly conserved among the immune cells. CONCLUSIONS: This study is the first to provide a comprehensive analysis of the cross‐species single‐cell transcriptome atlas for peripheral blood mononuclear cells (PBMCs). This research should advance our understanding of the cellular taxonomy and fundamental functions of PBMCs, with important implications in evolutionary biology, developmental biology, and immune system disorders.
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spelling pubmed-88004832022-02-04 Molecular mechanisms governing circulating immune cell heterogeneity across different species revealed by single‐cell sequencing Li, Zhibin Sun, Chengcheng Wang, Fei Wang, Xiran Zhu, Jiacheng Luo, Lihua Ding, Xiangning Zhang, Yanan Ding, Peiwen Wang, Haoyu Pu, Mingyi Li, Yuejiao Wang, Shiyou Qin, Qiuyu Wei, Yanan Sun, Jian Wang, Xiangdong Luo, Yonglun Chen, Dongsheng Qiu, Wei Clin Transl Med Research Articles BACKGROUND: Immune cells play important roles in mediating immune response and host defense against invading pathogens. However, insights into the molecular mechanisms governing circulating immune cell diversity among multiple species are limited. METHODS: In this study, we compared the single‐cell transcriptomes of immune cells from 12 species. Distinct molecular profiles were characterized for different immune cell types, including T cells, B cells, natural killer cells, monocytes, and dendritic cells. RESULTS: Our data revealed the heterogeneity and compositions of circulating immune cells among 12 different species. Additionally, we explored the conserved and divergent cellular crosstalks and genetic regulatory networks among vertebrate immune cells. Notably, the ligand and receptor pair VIM‐CD44 was highly conserved among the immune cells. CONCLUSIONS: This study is the first to provide a comprehensive analysis of the cross‐species single‐cell transcriptome atlas for peripheral blood mononuclear cells (PBMCs). This research should advance our understanding of the cellular taxonomy and fundamental functions of PBMCs, with important implications in evolutionary biology, developmental biology, and immune system disorders. John Wiley and Sons Inc. 2022-01-29 /pmc/articles/PMC8800483/ /pubmed/35092700 http://dx.doi.org/10.1002/ctm2.689 Text en © 2022 The Authors. Clinical and Translational Medicine published by John Wiley & Sons Australia, Ltd on behalf of Shanghai Institute of Clinical Bioinformatics https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Li, Zhibin
Sun, Chengcheng
Wang, Fei
Wang, Xiran
Zhu, Jiacheng
Luo, Lihua
Ding, Xiangning
Zhang, Yanan
Ding, Peiwen
Wang, Haoyu
Pu, Mingyi
Li, Yuejiao
Wang, Shiyou
Qin, Qiuyu
Wei, Yanan
Sun, Jian
Wang, Xiangdong
Luo, Yonglun
Chen, Dongsheng
Qiu, Wei
Molecular mechanisms governing circulating immune cell heterogeneity across different species revealed by single‐cell sequencing
title Molecular mechanisms governing circulating immune cell heterogeneity across different species revealed by single‐cell sequencing
title_full Molecular mechanisms governing circulating immune cell heterogeneity across different species revealed by single‐cell sequencing
title_fullStr Molecular mechanisms governing circulating immune cell heterogeneity across different species revealed by single‐cell sequencing
title_full_unstemmed Molecular mechanisms governing circulating immune cell heterogeneity across different species revealed by single‐cell sequencing
title_short Molecular mechanisms governing circulating immune cell heterogeneity across different species revealed by single‐cell sequencing
title_sort molecular mechanisms governing circulating immune cell heterogeneity across different species revealed by single‐cell sequencing
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8800483/
https://www.ncbi.nlm.nih.gov/pubmed/35092700
http://dx.doi.org/10.1002/ctm2.689
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