Cargando…
Identification of parameters and formulation of a statistical and machine learning model to identify Babesia canis infections in dogs using available ADVIA hematology analyzer data
BACKGROUND: Canine babesiosis is an important tick-borne disease in endemic regions. One of the relevant subspecies in Europe is Babesia canis, and it can cause severe clinical signs such as hemolytic anemia. Apart from acute clinical symptoms dogs can also have a more chronic disease development or...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8801090/ https://www.ncbi.nlm.nih.gov/pubmed/35093154 http://dx.doi.org/10.1186/s13071-022-05163-4 |
_version_ | 1784642378445881344 |
---|---|
author | Pijnacker, Tera Bartels, Richard van Leeuwen, Martin Teske, Erik |
author_facet | Pijnacker, Tera Bartels, Richard van Leeuwen, Martin Teske, Erik |
author_sort | Pijnacker, Tera |
collection | PubMed |
description | BACKGROUND: Canine babesiosis is an important tick-borne disease in endemic regions. One of the relevant subspecies in Europe is Babesia canis, and it can cause severe clinical signs such as hemolytic anemia. Apart from acute clinical symptoms dogs can also have a more chronic disease development or be asymptomatic carriers. Our objective was to identify readily available ADVIA hematology analyzer parameters suggestive of B. canis parasitemia in dogs and to formulate a predictive model. METHODS: A historical dataset of complete blood count data from an ADVIA hematology system with blood smear or PCR confirmed parasitemia cases was used to obtain a model by conventional statistics (CS) methods and machine learning (ML) using logistical regression and tree methods. RESULTS: Both methods identified that important parameters were platelet count, mean platelet volume and percentage large unstained cells. We were able to formulate a CS model and ML model to screen for Babesia parasitemia in dogs with a sensitivity of 84.6% (CS) and 100% (ML), a specificity of 97.7% (CS) and 95.7% (ML) and a positive likelihood ratio (LR+) of 36.78 (CS) and 23.2 (ML). CONCLUSIONS: This study introduces two methods of screening for B. canis parasitemia on readily available data from ADVIA hematology systems. The algorithms can easily be introduced in laboratories that use these analyzers. When the algorithm marks a sample as ‘suggestive’ for Babesia parasitemia, the sample is approximately 37 times more likely to show Babesia merozoites on blood smear analysis. GRAPHICAL ABSTRACT: [Image: see text] |
format | Online Article Text |
id | pubmed-8801090 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-88010902022-02-02 Identification of parameters and formulation of a statistical and machine learning model to identify Babesia canis infections in dogs using available ADVIA hematology analyzer data Pijnacker, Tera Bartels, Richard van Leeuwen, Martin Teske, Erik Parasit Vectors Research BACKGROUND: Canine babesiosis is an important tick-borne disease in endemic regions. One of the relevant subspecies in Europe is Babesia canis, and it can cause severe clinical signs such as hemolytic anemia. Apart from acute clinical symptoms dogs can also have a more chronic disease development or be asymptomatic carriers. Our objective was to identify readily available ADVIA hematology analyzer parameters suggestive of B. canis parasitemia in dogs and to formulate a predictive model. METHODS: A historical dataset of complete blood count data from an ADVIA hematology system with blood smear or PCR confirmed parasitemia cases was used to obtain a model by conventional statistics (CS) methods and machine learning (ML) using logistical regression and tree methods. RESULTS: Both methods identified that important parameters were platelet count, mean platelet volume and percentage large unstained cells. We were able to formulate a CS model and ML model to screen for Babesia parasitemia in dogs with a sensitivity of 84.6% (CS) and 100% (ML), a specificity of 97.7% (CS) and 95.7% (ML) and a positive likelihood ratio (LR+) of 36.78 (CS) and 23.2 (ML). CONCLUSIONS: This study introduces two methods of screening for B. canis parasitemia on readily available data from ADVIA hematology systems. The algorithms can easily be introduced in laboratories that use these analyzers. When the algorithm marks a sample as ‘suggestive’ for Babesia parasitemia, the sample is approximately 37 times more likely to show Babesia merozoites on blood smear analysis. GRAPHICAL ABSTRACT: [Image: see text] BioMed Central 2022-01-29 /pmc/articles/PMC8801090/ /pubmed/35093154 http://dx.doi.org/10.1186/s13071-022-05163-4 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Pijnacker, Tera Bartels, Richard van Leeuwen, Martin Teske, Erik Identification of parameters and formulation of a statistical and machine learning model to identify Babesia canis infections in dogs using available ADVIA hematology analyzer data |
title | Identification of parameters and formulation of a statistical and machine learning model to identify Babesia canis infections in dogs using available ADVIA hematology analyzer data |
title_full | Identification of parameters and formulation of a statistical and machine learning model to identify Babesia canis infections in dogs using available ADVIA hematology analyzer data |
title_fullStr | Identification of parameters and formulation of a statistical and machine learning model to identify Babesia canis infections in dogs using available ADVIA hematology analyzer data |
title_full_unstemmed | Identification of parameters and formulation of a statistical and machine learning model to identify Babesia canis infections in dogs using available ADVIA hematology analyzer data |
title_short | Identification of parameters and formulation of a statistical and machine learning model to identify Babesia canis infections in dogs using available ADVIA hematology analyzer data |
title_sort | identification of parameters and formulation of a statistical and machine learning model to identify babesia canis infections in dogs using available advia hematology analyzer data |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8801090/ https://www.ncbi.nlm.nih.gov/pubmed/35093154 http://dx.doi.org/10.1186/s13071-022-05163-4 |
work_keys_str_mv | AT pijnackertera identificationofparametersandformulationofastatisticalandmachinelearningmodeltoidentifybabesiacanisinfectionsindogsusingavailableadviahematologyanalyzerdata AT bartelsrichard identificationofparametersandformulationofastatisticalandmachinelearningmodeltoidentifybabesiacanisinfectionsindogsusingavailableadviahematologyanalyzerdata AT vanleeuwenmartin identificationofparametersandformulationofastatisticalandmachinelearningmodeltoidentifybabesiacanisinfectionsindogsusingavailableadviahematologyanalyzerdata AT teskeerik identificationofparametersandformulationofastatisticalandmachinelearningmodeltoidentifybabesiacanisinfectionsindogsusingavailableadviahematologyanalyzerdata |