Cargando…

Metabarcoding of the phytotelmata of Pseudalcantarea grandis (Bromeliaceae) from an arid zone

BACKGROUND: Pseudalcantarea grandis (Schltdl.) Pinzón & Barfuss is a tank bromeliad that grows on cliffs in the southernmost portion of the Chihuahuan desert. Phytotelmata are water bodies formed by plants that function as micro-ecosystems where bacteria, algae, protists, insects, fungi, and som...

Descripción completa

Detalles Bibliográficos
Autores principales:	Herrera-García, José Alan, Martinez, Mahinda, Zamora-Tavares, Pilar, Vargas-Ponce, Ofelia, Hernández-Sandoval, Luis, Rodríguez-Zaragoza, Fabián Alejandro
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	PeerJ Inc. 2022
Materias:	Biodiversity
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8801176/ https://www.ncbi.nlm.nih.gov/pubmed/35127281 http://dx.doi.org/10.7717/peerj.12706

Ejemplares similares

Oomycete metabarcoding reveals the presence of Lagenidium spp. in phytotelmata
por: Leoro-Garzon, Paula, et al.
Publicado: (2019)

Unveiling the status of alien animals in the arid zone of Asia
por: Zhang, Lyubing, et al.
Publicado: (2016)

Taxonomic revision of Physalis in Mexico
por: Martínez, Mahinda, et al.
Publicado: (2023)

Unearthing soil arthropod diversity through DNA metabarcoding
por: Young, Monica R., et al.
Publicado: (2022)

Salinity effects on water potential and the normalized difference vegetation index in four species of a saline semi-arid ecosystem
por: Soto Gonzáles, Hebert Hernán, et al.
Publicado: (2021)

The effects of spatial and temporal replicate sampling on eDNA metabarcoding
por: Beentjes, Kevin K., et al.
Publicado: (2019)

A bright idea—metabarcoding arthropods from light fixtures
por: Elbrecht, Vasco, et al.
Publicado: (2021)

Influence of DNA extraction kits on freshwater fungal DNA metabarcoding
por: Matsuoka, Shunsuke, et al.
Publicado: (2022)

Using DNA metabarcoding to assess insect diversity in citrus orchards
por: Liu, Chenxi, et al.
Publicado: (2023)

Polyphasic evaluation of key cyanobacteria in biocrusts from the most arid region in Europe
por: Roncero-Ramos, Beatriz, et al.
Publicado: (2019)

Testing the potential of a ribosomal 16S marker for DNA metabarcoding of insects
por: Elbrecht, Vasco, et al.
Publicado: (2016)

Monitoring newt communities in urban area using eDNA metabarcoding
por: Charvoz, Léo, et al.
Publicado: (2021)

Environmental DNA metabarcoding for monitoring metazoan biodiversity in Antarctic nearshore ecosystems
por: Clarke, Laurence J., et al.
Publicado: (2021)

THAPBI PICT—a fast, cautious, and accurate metabarcoding analysis pipeline
por: Cock, Peter J. A., et al.
Publicado: (2023)

Can non-destructive DNA extraction of bulk invertebrate samples be used for metabarcoding?
por: Carew, Melissa E., et al.
Publicado: (2018)

Pooling size sorted Malaise trap fractions to maximize taxon recovery with metabarcoding
por: Elbrecht, Vasco, et al.
Publicado: (2021)

Flower diversity and bee reproduction in an arid ecosystem
por: Dorado, Jimena, et al.
Publicado: (2016)

Spatio-temporal monitoring of deep-sea communities using metabarcoding of sediment DNA and RNA
por: Guardiola, Magdalena, et al.
Publicado: (2016)

Culicidae-centric metabarcoding through targeted use of D2 ribosomal DNA primers
por: Pedro, Pedro M., et al.
Publicado: (2020)

Benthic invertebrates in Svalbard fjords—when metabarcoding does not outperform traditional biodiversity assessment
por: Willassen, Endre, et al.
Publicado: (2022)

Diversity and distribution of Symbiodiniaceae detected on coral reefs of Lombok, Indonesia using environmental DNA metabarcoding
por: Pratomo, Arief, et al.
Publicado: (2022)

Towards an in-depth characterization of Symbiodiniaceae in tropical giant clams via metabarcoding of pooled multi-gene amplicons
por: Pochon, Xavier, et al.
Publicado: (2019)

DNA metabarcoding of zooplankton communities: species diversity and seasonal variation revealed by 18S rRNA and COI
por: Zhao, Lina, et al.
Publicado: (2021)

Longitudinal metabarcode analysis of karst bacterioplankton microbiomes provide evidence of epikarst to cave transport and community succession
por: Morse, Kendall V., et al.
Publicado: (2021)

Grab what you can—an evaluation of spatial replication to decrease heterogeneity in sediment eDNA metabarcoding
por: Hestetun, Jon T., et al.
Publicado: (2021)

Be positive: customized reference databases and new, local barcodes balance false taxonomic assignments in metabarcoding studies
por: Mugnai, Francesco, et al.
Publicado: (2023)

Systematic review of marine environmental DNA metabarcoding studies: toward best practices for data usability and accessibility
por: Shea, Meghan M., et al.
Publicado: (2023)

Persisting roadblocks in arthropod monitoring using non-destructive metabarcoding from collection media of passive traps
por: Sire, Lucas, et al.
Publicado: (2023)

DNA metabarcoding of littoral hard-bottom communities: high diversity and database gaps revealed by two molecular markers
por: Wangensteen, Owen S., et al.
Publicado: (2018)

DNA metabarcoding allows non-invasive identification of arthropod prey provisioned to nestling Rufous hummingbirds (Selasphorus rufus)
por: Moran, Alison J., et al.
Publicado: (2019)

Development of the cephalopod-specific universal primer set and its application for the metabarcoding analysis of planktonic cephalopods in Korean waters
por: Kim, Eun-Bi, et al.
Publicado: (2019)

Mitochondrial cytochrome c oxidase subunit I (COI) metabarcoding of Foraminifera communities using taxon-specific primers
por: Macher, Jan-Niklas, et al.
Publicado: (2022)

High-throughput metabarcoding reveals the effect of physicochemical soil properties on soil and litter biodiversity and community turnover across Amazonia
por: Ritter, Camila D., et al.
Publicado: (2018)

DNA metabarcoding reveals that coyotes in New York City consume wide variety of native prey species and human food
por: Henger, Carol S., et al.
Publicado: (2022)

Metabarcoding dietary analysis of coral dwelling predatory fish demonstrates the minor contribution of coral mutualists to their highly partitioned, generalist diet
por: Leray, Matthieu, et al.
Publicado: (2015)

Effects of groundwater abstraction on two keystone tree species in an arid savanna national park
por: Shadwell, Eleanor, et al.
Publicado: (2017)

Spatial and temporal variations of aridity shape dung beetle assemblages towards the Sahara desert
por: deCastro-Arrazola, Indradatta, et al.
Publicado: (2018)

A highly diverse fungal community associated with leaves of the mangrove plant Acanthus ilicifolius var. xiamenensis revealed by isolation and metabarcoding analyses
por: Chi, Wei-Chiung, et al.
Publicado: (2019)

Spatiotemporal diversity, structure and trophic guilds of insect assemblages in a semi-arid Sabkha ecosystem
por: Chenchouni, Haroun, et al.
Publicado: (2015)

Amphibian and reptile biodiversity in the semi-arid region of the municipality of Nopala de Villagrán, Hidalgo, Mexico
por: Roth-Monzón, Andrea J., et al.
Publicado: (2018)

Cannot write session to /tmp/vufind_sessions/sess_4evtflp2tvra4ub1qubutvu3hi