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Development of a new serotyping ELISA for Toxoplasma gondii type II, type III and Africa 1 lineages using in silico peptide discovery methods, well categorized feline and human outbreak serum samples
BACKGROUND: Discovery of new Toxoplasma gondii serotyping epitopes is important due to reports showing the influence of genotype on the severity of toxoplasmosis. In Turkey, genotypes belonging to type II, type III and Africa 1 lineages were mainly detected. The present study focused on to find out...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8802539/ https://www.ncbi.nlm.nih.gov/pubmed/35100997 http://dx.doi.org/10.1186/s12879-022-07088-w |
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author | Can, Hüseyin Aksoy Gökmen, Ayşegül Döşkaya, Mert Erkunt Alak, Sedef Değirmenci Döşkaya, Aysu Karakavuk, Muhammet Köseoğlu, Ahmet Efe Karakavuk, Tuğba Gül, Ceren Güvendi, Mervenur Gül, Aytül Gürüz, Adnan Yüksel Kaya, Selçuk Mercier, Aurélien Ün, Cemal |
author_facet | Can, Hüseyin Aksoy Gökmen, Ayşegül Döşkaya, Mert Erkunt Alak, Sedef Değirmenci Döşkaya, Aysu Karakavuk, Muhammet Köseoğlu, Ahmet Efe Karakavuk, Tuğba Gül, Ceren Güvendi, Mervenur Gül, Aytül Gürüz, Adnan Yüksel Kaya, Selçuk Mercier, Aurélien Ün, Cemal |
author_sort | Can, Hüseyin |
collection | PubMed |
description | BACKGROUND: Discovery of new Toxoplasma gondii serotyping epitopes is important due to reports showing the influence of genotype on the severity of toxoplasmosis. In Turkey, genotypes belonging to type II, type III and Africa 1 lineages were mainly detected. The present study focused on to find out epitopes with high discriminative capacity to serotype these genotypes using well characterized strains isolated from Turkey. METHODS: To meet this objective, GRA6 and GRA7 genes were sequenced from strains belonging to the type II, III and Africa 1 lineages, and B cell epitopes inside these sequences were predicted by Bcepred and additional docking analysis was performed with B cell receptor. Based on these analyses, 22 peptides harboring lineage specific epitopes were synthesized. Then, the serotyping potency of these peptides was tested using peptide ELISA and well categorized serum samples collected from stray cats infected with genotypes of the different lineages type II (n:9), III (n:1) and Africa 1 (n:1). As a result of peptide-ELISA, a serotyping schema was constructed with peptides that show high discriminative capacity and this assay was validated by sera collected from humans after an outbreak (n:30) and mother/newborn pair sera (n:3). Later, the validated serotyping schema was used to serotype a larger group of human (n:38) and cat (n:24) sera. RESULTS: Among 22 peptides, GRA6II/c, GRA7III/d, and GRA6 Africa 1/b epitopes have shown discriminative capacity. During the validation of peptide-ELISA, the serotype of toxoplasmosis outbreak and mother/newborn cases were detected to be serotype II. Moreover, the analyses in a larger group showed that serotype II was prevalent in humans and stray cats. CONCLUSIONS: Overall, the results showed that the serotyping schema could be successfully used to serotype T. gondii infections caused by type II, III and Africa 1 genotype. |
format | Online Article Text |
id | pubmed-8802539 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-88025392022-01-31 Development of a new serotyping ELISA for Toxoplasma gondii type II, type III and Africa 1 lineages using in silico peptide discovery methods, well categorized feline and human outbreak serum samples Can, Hüseyin Aksoy Gökmen, Ayşegül Döşkaya, Mert Erkunt Alak, Sedef Değirmenci Döşkaya, Aysu Karakavuk, Muhammet Köseoğlu, Ahmet Efe Karakavuk, Tuğba Gül, Ceren Güvendi, Mervenur Gül, Aytül Gürüz, Adnan Yüksel Kaya, Selçuk Mercier, Aurélien Ün, Cemal BMC Infect Dis Research BACKGROUND: Discovery of new Toxoplasma gondii serotyping epitopes is important due to reports showing the influence of genotype on the severity of toxoplasmosis. In Turkey, genotypes belonging to type II, type III and Africa 1 lineages were mainly detected. The present study focused on to find out epitopes with high discriminative capacity to serotype these genotypes using well characterized strains isolated from Turkey. METHODS: To meet this objective, GRA6 and GRA7 genes were sequenced from strains belonging to the type II, III and Africa 1 lineages, and B cell epitopes inside these sequences were predicted by Bcepred and additional docking analysis was performed with B cell receptor. Based on these analyses, 22 peptides harboring lineage specific epitopes were synthesized. Then, the serotyping potency of these peptides was tested using peptide ELISA and well categorized serum samples collected from stray cats infected with genotypes of the different lineages type II (n:9), III (n:1) and Africa 1 (n:1). As a result of peptide-ELISA, a serotyping schema was constructed with peptides that show high discriminative capacity and this assay was validated by sera collected from humans after an outbreak (n:30) and mother/newborn pair sera (n:3). Later, the validated serotyping schema was used to serotype a larger group of human (n:38) and cat (n:24) sera. RESULTS: Among 22 peptides, GRA6II/c, GRA7III/d, and GRA6 Africa 1/b epitopes have shown discriminative capacity. During the validation of peptide-ELISA, the serotype of toxoplasmosis outbreak and mother/newborn cases were detected to be serotype II. Moreover, the analyses in a larger group showed that serotype II was prevalent in humans and stray cats. CONCLUSIONS: Overall, the results showed that the serotyping schema could be successfully used to serotype T. gondii infections caused by type II, III and Africa 1 genotype. BioMed Central 2022-01-31 /pmc/articles/PMC8802539/ /pubmed/35100997 http://dx.doi.org/10.1186/s12879-022-07088-w Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Can, Hüseyin Aksoy Gökmen, Ayşegül Döşkaya, Mert Erkunt Alak, Sedef Değirmenci Döşkaya, Aysu Karakavuk, Muhammet Köseoğlu, Ahmet Efe Karakavuk, Tuğba Gül, Ceren Güvendi, Mervenur Gül, Aytül Gürüz, Adnan Yüksel Kaya, Selçuk Mercier, Aurélien Ün, Cemal Development of a new serotyping ELISA for Toxoplasma gondii type II, type III and Africa 1 lineages using in silico peptide discovery methods, well categorized feline and human outbreak serum samples |
title | Development of a new serotyping ELISA for Toxoplasma gondii type II, type III and Africa 1 lineages using in silico peptide discovery methods, well categorized feline and human outbreak serum samples |
title_full | Development of a new serotyping ELISA for Toxoplasma gondii type II, type III and Africa 1 lineages using in silico peptide discovery methods, well categorized feline and human outbreak serum samples |
title_fullStr | Development of a new serotyping ELISA for Toxoplasma gondii type II, type III and Africa 1 lineages using in silico peptide discovery methods, well categorized feline and human outbreak serum samples |
title_full_unstemmed | Development of a new serotyping ELISA for Toxoplasma gondii type II, type III and Africa 1 lineages using in silico peptide discovery methods, well categorized feline and human outbreak serum samples |
title_short | Development of a new serotyping ELISA for Toxoplasma gondii type II, type III and Africa 1 lineages using in silico peptide discovery methods, well categorized feline and human outbreak serum samples |
title_sort | development of a new serotyping elisa for toxoplasma gondii type ii, type iii and africa 1 lineages using in silico peptide discovery methods, well categorized feline and human outbreak serum samples |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8802539/ https://www.ncbi.nlm.nih.gov/pubmed/35100997 http://dx.doi.org/10.1186/s12879-022-07088-w |
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