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The complete mitogenome of the Thai soldier crab Mictyris thailandensis Davie, Wisespongpand & Shih, 2013 (Crustacea: Decapoda: Mictyridae)

Mictyris thailandensis has been described recently in the family Mictyridae which is found only in the Andaman Sea, west coast of Thailand. In this study, we performed shotgun genome sequencing of a male M. thailandensis using a paired-end (150 bp) sequencing chemistry on MGISEQ-2000RS and report th...

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Autores principales: Sonthirod, Chutima, U-thoomporn, Sonicha, Naktang, Chaiwat, Pootakham, Wirulda, Tangphatsornruang, Sithichoke, Promdam, Rueangrit, Nualla-ong, Aekkaraj, Pongparadon, Supattra
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8803110/
https://www.ncbi.nlm.nih.gov/pubmed/35111942
http://dx.doi.org/10.1080/23802359.2021.2024770
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author Sonthirod, Chutima
U-thoomporn, Sonicha
Naktang, Chaiwat
Pootakham, Wirulda
Tangphatsornruang, Sithichoke
Promdam, Rueangrit
Nualla-ong, Aekkaraj
Pongparadon, Supattra
author_facet Sonthirod, Chutima
U-thoomporn, Sonicha
Naktang, Chaiwat
Pootakham, Wirulda
Tangphatsornruang, Sithichoke
Promdam, Rueangrit
Nualla-ong, Aekkaraj
Pongparadon, Supattra
author_sort Sonthirod, Chutima
collection PubMed
description Mictyris thailandensis has been described recently in the family Mictyridae which is found only in the Andaman Sea, west coast of Thailand. In this study, we performed shotgun genome sequencing of a male M. thailandensis using a paired-end (150 bp) sequencing chemistry on MGISEQ-2000RS and report the complete mitochondrial genome of M. thailandensis (15,557 bp). A total of 37 genes have been annotated: 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), two ribosomal RNA genes (rRNAs), and a control region. Comparative phylogenetic analysis with 29 crustaceans based on 13 conserved genes demonstrated that M. thailandensis is closely related to other soldier crabs in the family Mictyridae. The mitogenome of M. thailandensis presented here provides useful genetic information to help understand the evolutionary relationships among the Mictyridae family members.
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spelling pubmed-88031102022-02-01 The complete mitogenome of the Thai soldier crab Mictyris thailandensis Davie, Wisespongpand & Shih, 2013 (Crustacea: Decapoda: Mictyridae) Sonthirod, Chutima U-thoomporn, Sonicha Naktang, Chaiwat Pootakham, Wirulda Tangphatsornruang, Sithichoke Promdam, Rueangrit Nualla-ong, Aekkaraj Pongparadon, Supattra Mitochondrial DNA B Resour Mitogenome Announcement Mictyris thailandensis has been described recently in the family Mictyridae which is found only in the Andaman Sea, west coast of Thailand. In this study, we performed shotgun genome sequencing of a male M. thailandensis using a paired-end (150 bp) sequencing chemistry on MGISEQ-2000RS and report the complete mitochondrial genome of M. thailandensis (15,557 bp). A total of 37 genes have been annotated: 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), two ribosomal RNA genes (rRNAs), and a control region. Comparative phylogenetic analysis with 29 crustaceans based on 13 conserved genes demonstrated that M. thailandensis is closely related to other soldier crabs in the family Mictyridae. The mitogenome of M. thailandensis presented here provides useful genetic information to help understand the evolutionary relationships among the Mictyridae family members. Taylor & Francis 2022-01-27 /pmc/articles/PMC8803110/ /pubmed/35111942 http://dx.doi.org/10.1080/23802359.2021.2024770 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Sonthirod, Chutima
U-thoomporn, Sonicha
Naktang, Chaiwat
Pootakham, Wirulda
Tangphatsornruang, Sithichoke
Promdam, Rueangrit
Nualla-ong, Aekkaraj
Pongparadon, Supattra
The complete mitogenome of the Thai soldier crab Mictyris thailandensis Davie, Wisespongpand & Shih, 2013 (Crustacea: Decapoda: Mictyridae)
title The complete mitogenome of the Thai soldier crab Mictyris thailandensis Davie, Wisespongpand & Shih, 2013 (Crustacea: Decapoda: Mictyridae)
title_full The complete mitogenome of the Thai soldier crab Mictyris thailandensis Davie, Wisespongpand & Shih, 2013 (Crustacea: Decapoda: Mictyridae)
title_fullStr The complete mitogenome of the Thai soldier crab Mictyris thailandensis Davie, Wisespongpand & Shih, 2013 (Crustacea: Decapoda: Mictyridae)
title_full_unstemmed The complete mitogenome of the Thai soldier crab Mictyris thailandensis Davie, Wisespongpand & Shih, 2013 (Crustacea: Decapoda: Mictyridae)
title_short The complete mitogenome of the Thai soldier crab Mictyris thailandensis Davie, Wisespongpand & Shih, 2013 (Crustacea: Decapoda: Mictyridae)
title_sort complete mitogenome of the thai soldier crab mictyris thailandensis davie, wisespongpand & shih, 2013 (crustacea: decapoda: mictyridae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8803110/
https://www.ncbi.nlm.nih.gov/pubmed/35111942
http://dx.doi.org/10.1080/23802359.2021.2024770
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