Cargando…

A hybrid approach based on deep learning and level set formulation for liver segmentation in CT images

Accurate liver segmentation is essential for radiation therapy planning of hepatocellular carcinoma and absorbed dose calculation. However, liver segmentation is a challenging task due to the anatomical variability in both shape and size and the low contrast between liver and its surrounding organs....

Descripción completa

Detalles Bibliográficos
Autores principales: Gong, Zhaoxuan, Guo, Cui, Guo, Wei, Zhao, Dazhe, Tan, Wenjun, Zhou, Wei, Zhang, Guodong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8803306/
https://www.ncbi.nlm.nih.gov/pubmed/34873831
http://dx.doi.org/10.1002/acm2.13482
_version_ 1784642841363873792
author Gong, Zhaoxuan
Guo, Cui
Guo, Wei
Zhao, Dazhe
Tan, Wenjun
Zhou, Wei
Zhang, Guodong
author_facet Gong, Zhaoxuan
Guo, Cui
Guo, Wei
Zhao, Dazhe
Tan, Wenjun
Zhou, Wei
Zhang, Guodong
author_sort Gong, Zhaoxuan
collection PubMed
description Accurate liver segmentation is essential for radiation therapy planning of hepatocellular carcinoma and absorbed dose calculation. However, liver segmentation is a challenging task due to the anatomical variability in both shape and size and the low contrast between liver and its surrounding organs. Thus we propose a convolutional neural network (CNN) for automated liver segmentation. In our method, fractional differential enhancement is firstly applied for preprocessing. Subsequently, an initial liver segmentation is obtained by using a CNN. Finally, accurate liver segmentation is achieved by the evolution of an active contour model. Experimental results show that the proposed method outperforms existing methods. One hundred fifty CT scans are evaluated for the experiment. For liver segmentation, Dice of 95.8%, true positive rate of 95.1%, positive predictive value of 93.2%, and volume difference of 7% are calculated. In addition, the values of these evaluation measures show that the proposed method is able to provide a precise and robust segmentation estimate, which can also assist the manual liver segmentation task.
format Online
Article
Text
id pubmed-8803306
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-88033062022-02-04 A hybrid approach based on deep learning and level set formulation for liver segmentation in CT images Gong, Zhaoxuan Guo, Cui Guo, Wei Zhao, Dazhe Tan, Wenjun Zhou, Wei Zhang, Guodong J Appl Clin Med Phys Radiation Oncology Physics Accurate liver segmentation is essential for radiation therapy planning of hepatocellular carcinoma and absorbed dose calculation. However, liver segmentation is a challenging task due to the anatomical variability in both shape and size and the low contrast between liver and its surrounding organs. Thus we propose a convolutional neural network (CNN) for automated liver segmentation. In our method, fractional differential enhancement is firstly applied for preprocessing. Subsequently, an initial liver segmentation is obtained by using a CNN. Finally, accurate liver segmentation is achieved by the evolution of an active contour model. Experimental results show that the proposed method outperforms existing methods. One hundred fifty CT scans are evaluated for the experiment. For liver segmentation, Dice of 95.8%, true positive rate of 95.1%, positive predictive value of 93.2%, and volume difference of 7% are calculated. In addition, the values of these evaluation measures show that the proposed method is able to provide a precise and robust segmentation estimate, which can also assist the manual liver segmentation task. John Wiley and Sons Inc. 2021-12-06 /pmc/articles/PMC8803306/ /pubmed/34873831 http://dx.doi.org/10.1002/acm2.13482 Text en © 2021 The Authors. Journal of Applied Clinical Medical Physics published by Wiley Periodicals, LLC on behalf of The American Association of Physicists in Medicine https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Radiation Oncology Physics
Gong, Zhaoxuan
Guo, Cui
Guo, Wei
Zhao, Dazhe
Tan, Wenjun
Zhou, Wei
Zhang, Guodong
A hybrid approach based on deep learning and level set formulation for liver segmentation in CT images
title A hybrid approach based on deep learning and level set formulation for liver segmentation in CT images
title_full A hybrid approach based on deep learning and level set formulation for liver segmentation in CT images
title_fullStr A hybrid approach based on deep learning and level set formulation for liver segmentation in CT images
title_full_unstemmed A hybrid approach based on deep learning and level set formulation for liver segmentation in CT images
title_short A hybrid approach based on deep learning and level set formulation for liver segmentation in CT images
title_sort hybrid approach based on deep learning and level set formulation for liver segmentation in ct images
topic Radiation Oncology Physics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8803306/
https://www.ncbi.nlm.nih.gov/pubmed/34873831
http://dx.doi.org/10.1002/acm2.13482
work_keys_str_mv AT gongzhaoxuan ahybridapproachbasedondeeplearningandlevelsetformulationforliversegmentationinctimages
AT guocui ahybridapproachbasedondeeplearningandlevelsetformulationforliversegmentationinctimages
AT guowei ahybridapproachbasedondeeplearningandlevelsetformulationforliversegmentationinctimages
AT zhaodazhe ahybridapproachbasedondeeplearningandlevelsetformulationforliversegmentationinctimages
AT tanwenjun ahybridapproachbasedondeeplearningandlevelsetformulationforliversegmentationinctimages
AT zhouwei ahybridapproachbasedondeeplearningandlevelsetformulationforliversegmentationinctimages
AT zhangguodong ahybridapproachbasedondeeplearningandlevelsetformulationforliversegmentationinctimages
AT gongzhaoxuan hybridapproachbasedondeeplearningandlevelsetformulationforliversegmentationinctimages
AT guocui hybridapproachbasedondeeplearningandlevelsetformulationforliversegmentationinctimages
AT guowei hybridapproachbasedondeeplearningandlevelsetformulationforliversegmentationinctimages
AT zhaodazhe hybridapproachbasedondeeplearningandlevelsetformulationforliversegmentationinctimages
AT tanwenjun hybridapproachbasedondeeplearningandlevelsetformulationforliversegmentationinctimages
AT zhouwei hybridapproachbasedondeeplearningandlevelsetformulationforliversegmentationinctimages
AT zhangguodong hybridapproachbasedondeeplearningandlevelsetformulationforliversegmentationinctimages