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A hybrid approach based on deep learning and level set formulation for liver segmentation in CT images
Accurate liver segmentation is essential for radiation therapy planning of hepatocellular carcinoma and absorbed dose calculation. However, liver segmentation is a challenging task due to the anatomical variability in both shape and size and the low contrast between liver and its surrounding organs....
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8803306/ https://www.ncbi.nlm.nih.gov/pubmed/34873831 http://dx.doi.org/10.1002/acm2.13482 |
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author | Gong, Zhaoxuan Guo, Cui Guo, Wei Zhao, Dazhe Tan, Wenjun Zhou, Wei Zhang, Guodong |
author_facet | Gong, Zhaoxuan Guo, Cui Guo, Wei Zhao, Dazhe Tan, Wenjun Zhou, Wei Zhang, Guodong |
author_sort | Gong, Zhaoxuan |
collection | PubMed |
description | Accurate liver segmentation is essential for radiation therapy planning of hepatocellular carcinoma and absorbed dose calculation. However, liver segmentation is a challenging task due to the anatomical variability in both shape and size and the low contrast between liver and its surrounding organs. Thus we propose a convolutional neural network (CNN) for automated liver segmentation. In our method, fractional differential enhancement is firstly applied for preprocessing. Subsequently, an initial liver segmentation is obtained by using a CNN. Finally, accurate liver segmentation is achieved by the evolution of an active contour model. Experimental results show that the proposed method outperforms existing methods. One hundred fifty CT scans are evaluated for the experiment. For liver segmentation, Dice of 95.8%, true positive rate of 95.1%, positive predictive value of 93.2%, and volume difference of 7% are calculated. In addition, the values of these evaluation measures show that the proposed method is able to provide a precise and robust segmentation estimate, which can also assist the manual liver segmentation task. |
format | Online Article Text |
id | pubmed-8803306 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-88033062022-02-04 A hybrid approach based on deep learning and level set formulation for liver segmentation in CT images Gong, Zhaoxuan Guo, Cui Guo, Wei Zhao, Dazhe Tan, Wenjun Zhou, Wei Zhang, Guodong J Appl Clin Med Phys Radiation Oncology Physics Accurate liver segmentation is essential for radiation therapy planning of hepatocellular carcinoma and absorbed dose calculation. However, liver segmentation is a challenging task due to the anatomical variability in both shape and size and the low contrast between liver and its surrounding organs. Thus we propose a convolutional neural network (CNN) for automated liver segmentation. In our method, fractional differential enhancement is firstly applied for preprocessing. Subsequently, an initial liver segmentation is obtained by using a CNN. Finally, accurate liver segmentation is achieved by the evolution of an active contour model. Experimental results show that the proposed method outperforms existing methods. One hundred fifty CT scans are evaluated for the experiment. For liver segmentation, Dice of 95.8%, true positive rate of 95.1%, positive predictive value of 93.2%, and volume difference of 7% are calculated. In addition, the values of these evaluation measures show that the proposed method is able to provide a precise and robust segmentation estimate, which can also assist the manual liver segmentation task. John Wiley and Sons Inc. 2021-12-06 /pmc/articles/PMC8803306/ /pubmed/34873831 http://dx.doi.org/10.1002/acm2.13482 Text en © 2021 The Authors. Journal of Applied Clinical Medical Physics published by Wiley Periodicals, LLC on behalf of The American Association of Physicists in Medicine https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Radiation Oncology Physics Gong, Zhaoxuan Guo, Cui Guo, Wei Zhao, Dazhe Tan, Wenjun Zhou, Wei Zhang, Guodong A hybrid approach based on deep learning and level set formulation for liver segmentation in CT images |
title | A hybrid approach based on deep learning and level set formulation for liver segmentation in CT images |
title_full | A hybrid approach based on deep learning and level set formulation for liver segmentation in CT images |
title_fullStr | A hybrid approach based on deep learning and level set formulation for liver segmentation in CT images |
title_full_unstemmed | A hybrid approach based on deep learning and level set formulation for liver segmentation in CT images |
title_short | A hybrid approach based on deep learning and level set formulation for liver segmentation in CT images |
title_sort | hybrid approach based on deep learning and level set formulation for liver segmentation in ct images |
topic | Radiation Oncology Physics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8803306/ https://www.ncbi.nlm.nih.gov/pubmed/34873831 http://dx.doi.org/10.1002/acm2.13482 |
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