Cargando…

Identification of Five Ferroptosis-Related LncRNAs as Novel Prognosis and Diagnosis Signatures for Renal Cancer

Background: Ferroptosis is a novel regulated cell death that is characterized by iron-dependent oxidative damage. Renal cancer is the second most common cancer of the urinary system, which is highly correlated with iron metabolism. The aim of our present study was to identify suitable ferroptosis-re...

Descripción completa

Detalles Bibliográficos
Autores principales: Shu, Xiangjun, Zhang, Zaiqi, Yao, Zhi-Yong, Xing, Xiao-Liang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8804361/
https://www.ncbi.nlm.nih.gov/pubmed/35118117
http://dx.doi.org/10.3389/fmolb.2021.763697
_version_ 1784643060367360000
author Shu, Xiangjun
Zhang, Zaiqi
Yao, Zhi-Yong
Xing, Xiao-Liang
author_facet Shu, Xiangjun
Zhang, Zaiqi
Yao, Zhi-Yong
Xing, Xiao-Liang
author_sort Shu, Xiangjun
collection PubMed
description Background: Ferroptosis is a novel regulated cell death that is characterized by iron-dependent oxidative damage. Renal cancer is the second most common cancer of the urinary system, which is highly correlated with iron metabolism. The aim of our present study was to identify suitable ferroptosis-related prognosis signatures for renal cancer. Methods: We downloaded the RNA-seq count data of renal cancer from The Cancer Genome Atlas database and used the DESeq2, Survival, and Cox regression analyses to screen the prognosis signatures. Results: We identified 5 ferroptosis-related differentially expressed lncRNAs (FR-DELs) (DOCK8-AS1, SNHG17, RUSC1-AS1, LINC02609, and LUCAT1) to be independently correlated with the overall survival (OS) of patients with renal cancer. The risk assessment model and diagnosis model constructed by those 5 FR-DELs could well predict the outcome and the diagnosis of renal cancer. Conclusion: Our present study not only suggested those 5 FR-DELs could be used as prognosis and diagnosis signatures for renal cancer but also provided strategies for other cancers in the screening of ferroptosis-related biomarkers.
format Online
Article
Text
id pubmed-8804361
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-88043612022-02-02 Identification of Five Ferroptosis-Related LncRNAs as Novel Prognosis and Diagnosis Signatures for Renal Cancer Shu, Xiangjun Zhang, Zaiqi Yao, Zhi-Yong Xing, Xiao-Liang Front Mol Biosci Molecular Biosciences Background: Ferroptosis is a novel regulated cell death that is characterized by iron-dependent oxidative damage. Renal cancer is the second most common cancer of the urinary system, which is highly correlated with iron metabolism. The aim of our present study was to identify suitable ferroptosis-related prognosis signatures for renal cancer. Methods: We downloaded the RNA-seq count data of renal cancer from The Cancer Genome Atlas database and used the DESeq2, Survival, and Cox regression analyses to screen the prognosis signatures. Results: We identified 5 ferroptosis-related differentially expressed lncRNAs (FR-DELs) (DOCK8-AS1, SNHG17, RUSC1-AS1, LINC02609, and LUCAT1) to be independently correlated with the overall survival (OS) of patients with renal cancer. The risk assessment model and diagnosis model constructed by those 5 FR-DELs could well predict the outcome and the diagnosis of renal cancer. Conclusion: Our present study not only suggested those 5 FR-DELs could be used as prognosis and diagnosis signatures for renal cancer but also provided strategies for other cancers in the screening of ferroptosis-related biomarkers. Frontiers Media S.A. 2022-01-18 /pmc/articles/PMC8804361/ /pubmed/35118117 http://dx.doi.org/10.3389/fmolb.2021.763697 Text en Copyright © 2022 Shu, Zhang, Yao and Xing. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Molecular Biosciences
Shu, Xiangjun
Zhang, Zaiqi
Yao, Zhi-Yong
Xing, Xiao-Liang
Identification of Five Ferroptosis-Related LncRNAs as Novel Prognosis and Diagnosis Signatures for Renal Cancer
title Identification of Five Ferroptosis-Related LncRNAs as Novel Prognosis and Diagnosis Signatures for Renal Cancer
title_full Identification of Five Ferroptosis-Related LncRNAs as Novel Prognosis and Diagnosis Signatures for Renal Cancer
title_fullStr Identification of Five Ferroptosis-Related LncRNAs as Novel Prognosis and Diagnosis Signatures for Renal Cancer
title_full_unstemmed Identification of Five Ferroptosis-Related LncRNAs as Novel Prognosis and Diagnosis Signatures for Renal Cancer
title_short Identification of Five Ferroptosis-Related LncRNAs as Novel Prognosis and Diagnosis Signatures for Renal Cancer
title_sort identification of five ferroptosis-related lncrnas as novel prognosis and diagnosis signatures for renal cancer
topic Molecular Biosciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8804361/
https://www.ncbi.nlm.nih.gov/pubmed/35118117
http://dx.doi.org/10.3389/fmolb.2021.763697
work_keys_str_mv AT shuxiangjun identificationoffiveferroptosisrelatedlncrnasasnovelprognosisanddiagnosissignaturesforrenalcancer
AT zhangzaiqi identificationoffiveferroptosisrelatedlncrnasasnovelprognosisanddiagnosissignaturesforrenalcancer
AT yaozhiyong identificationoffiveferroptosisrelatedlncrnasasnovelprognosisanddiagnosissignaturesforrenalcancer
AT xingxiaoliang identificationoffiveferroptosisrelatedlncrnasasnovelprognosisanddiagnosissignaturesforrenalcancer