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Detecting ice artefacts in processed macromolecular diffraction data with machine learning

Contamination with diffraction from ice crystals can negatively affect, or even impede, macromolecular structure determination, and therefore detecting the resulting artefacts in diffraction data is crucial. However, once the data have been processed it can be very difficult to automatically recogni...

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Detalles Bibliográficos
Autores principales: Nolte, Kristopher, Gao, Yunyun, Stäb, Sabrina, Kollmannsberger, Philip, Thorn, Andrea
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8805301/
https://www.ncbi.nlm.nih.gov/pubmed/35102884
http://dx.doi.org/10.1107/S205979832101202X
Descripción
Sumario:Contamination with diffraction from ice crystals can negatively affect, or even impede, macromolecular structure determination, and therefore detecting the resulting artefacts in diffraction data is crucial. However, once the data have been processed it can be very difficult to automatically recognize this problem. To address this, a set of convolutional neural networks named Helcaraxe has been developed which can detect ice-diffraction artefacts in processed diffraction data from macromolecular crystals. The networks outperform previous algorithms and will be available as part of the AUSPEX web server and the CCP4-distributed software.