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Of mice and human-specific long noncoding RNAs

The number of human LncRNAs has now exceeded all known protein-coding genes. Most studies of human LncRNAs have been conducted in cell culture systems where various mechanisms of action have been worked out. On the other hand, efforts to elucidate the function of human LncRNAs in an in vivo setting...

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Autores principales: Ghanam, Amr R., Bryant, William B., Miano, Joseph M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8806012/
https://www.ncbi.nlm.nih.gov/pubmed/35106622
http://dx.doi.org/10.1007/s00335-022-09943-2
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author Ghanam, Amr R.
Bryant, William B.
Miano, Joseph M.
author_facet Ghanam, Amr R.
Bryant, William B.
Miano, Joseph M.
author_sort Ghanam, Amr R.
collection PubMed
description The number of human LncRNAs has now exceeded all known protein-coding genes. Most studies of human LncRNAs have been conducted in cell culture systems where various mechanisms of action have been worked out. On the other hand, efforts to elucidate the function of human LncRNAs in an in vivo setting have been limited. In this brief review, we highlight some strengths and weaknesses of studying human LncRNAs in the mouse. Special consideration is given to bacterial artificial chromosome transgenesis and genome editing. The integration of these technical innovations offers an unprecedented opportunity to complement and extend the expansive literature of cell culture models for the study of human LncRNAs. Two different examples of how BAC transgenesis and genome editing can be leveraged to gain insight into human LncRNA regulation and function in mice are presented: the random integration of a vascular cell-enriched LncRNA and a targeted approach for a new LncRNA immediately upstream of the ACE2 gene, which encodes the receptor for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the etiologic agent underlying the coronavirus disease-19 (COVID-19) pandemic.
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spelling pubmed-88060122022-02-02 Of mice and human-specific long noncoding RNAs Ghanam, Amr R. Bryant, William B. Miano, Joseph M. Mamm Genome Article The number of human LncRNAs has now exceeded all known protein-coding genes. Most studies of human LncRNAs have been conducted in cell culture systems where various mechanisms of action have been worked out. On the other hand, efforts to elucidate the function of human LncRNAs in an in vivo setting have been limited. In this brief review, we highlight some strengths and weaknesses of studying human LncRNAs in the mouse. Special consideration is given to bacterial artificial chromosome transgenesis and genome editing. The integration of these technical innovations offers an unprecedented opportunity to complement and extend the expansive literature of cell culture models for the study of human LncRNAs. Two different examples of how BAC transgenesis and genome editing can be leveraged to gain insight into human LncRNA regulation and function in mice are presented: the random integration of a vascular cell-enriched LncRNA and a targeted approach for a new LncRNA immediately upstream of the ACE2 gene, which encodes the receptor for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the etiologic agent underlying the coronavirus disease-19 (COVID-19) pandemic. Springer US 2022-02-01 2022 /pmc/articles/PMC8806012/ /pubmed/35106622 http://dx.doi.org/10.1007/s00335-022-09943-2 Text en © The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2022, corrected publication 2022 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Article
Ghanam, Amr R.
Bryant, William B.
Miano, Joseph M.
Of mice and human-specific long noncoding RNAs
title Of mice and human-specific long noncoding RNAs
title_full Of mice and human-specific long noncoding RNAs
title_fullStr Of mice and human-specific long noncoding RNAs
title_full_unstemmed Of mice and human-specific long noncoding RNAs
title_short Of mice and human-specific long noncoding RNAs
title_sort of mice and human-specific long noncoding rnas
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8806012/
https://www.ncbi.nlm.nih.gov/pubmed/35106622
http://dx.doi.org/10.1007/s00335-022-09943-2
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