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MicroRNA expression profile and identification of novel microRNA biomarkers for metabolic syndrome
The lack of efficient biomarkers is the main reason for the inaccurate early diagnosis and poor treatment outcomes of patients with metabolic syndrome (MetS). The current study aimed to identify several novel microRNA (miRNA) biomarkers for metabolic syndrome via high-throughput sequencing and compr...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8806888/ https://www.ncbi.nlm.nih.gov/pubmed/34269146 http://dx.doi.org/10.1080/21655979.2021.1952817 |
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author | Liu, Guanzhi Lei, Yutian Luo, Sen Huang, Zhuo Chen, Chen Wang, Kunzheng Yang, Pei Huang, Xin |
author_facet | Liu, Guanzhi Lei, Yutian Luo, Sen Huang, Zhuo Chen, Chen Wang, Kunzheng Yang, Pei Huang, Xin |
author_sort | Liu, Guanzhi |
collection | PubMed |
description | The lack of efficient biomarkers is the main reason for the inaccurate early diagnosis and poor treatment outcomes of patients with metabolic syndrome (MetS). The current study aimed to identify several novel microRNA (miRNA) biomarkers for metabolic syndrome via high-throughput sequencing and comprehensive bioinformatics analysis. Through high-throughput sequencing and differentially expressed miRNA (DEM) analysis, we first identified two upregulated and 36 downregulated DEMs in the plasma samples of patients with MetS compared to the healthy volunteers. Additionally, we also predicted 379 potential target genes and subsequently carried out enrichment analysis and protein–protein interaction network analysis to investigate the signaling pathways and functions of the identified DEMs as well as the interactions between their target genes. Furthermore, we selected two upregulated and top 10 downregulated DEMs with the highest |log2FC| values as the key microRNAs, which may serve as potential biomarkers for MetS. RT-qPCR was performed to validated these result. Finally, hsa-miR-526b-5p, hsa-miR-6516-5p was identified as the novel biomarkers for MetS. |
format | Online Article Text |
id | pubmed-8806888 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-88068882022-02-02 MicroRNA expression profile and identification of novel microRNA biomarkers for metabolic syndrome Liu, Guanzhi Lei, Yutian Luo, Sen Huang, Zhuo Chen, Chen Wang, Kunzheng Yang, Pei Huang, Xin Bioengineered Research Paper The lack of efficient biomarkers is the main reason for the inaccurate early diagnosis and poor treatment outcomes of patients with metabolic syndrome (MetS). The current study aimed to identify several novel microRNA (miRNA) biomarkers for metabolic syndrome via high-throughput sequencing and comprehensive bioinformatics analysis. Through high-throughput sequencing and differentially expressed miRNA (DEM) analysis, we first identified two upregulated and 36 downregulated DEMs in the plasma samples of patients with MetS compared to the healthy volunteers. Additionally, we also predicted 379 potential target genes and subsequently carried out enrichment analysis and protein–protein interaction network analysis to investigate the signaling pathways and functions of the identified DEMs as well as the interactions between their target genes. Furthermore, we selected two upregulated and top 10 downregulated DEMs with the highest |log2FC| values as the key microRNAs, which may serve as potential biomarkers for MetS. RT-qPCR was performed to validated these result. Finally, hsa-miR-526b-5p, hsa-miR-6516-5p was identified as the novel biomarkers for MetS. Taylor & Francis 2021-07-16 /pmc/articles/PMC8806888/ /pubmed/34269146 http://dx.doi.org/10.1080/21655979.2021.1952817 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Paper Liu, Guanzhi Lei, Yutian Luo, Sen Huang, Zhuo Chen, Chen Wang, Kunzheng Yang, Pei Huang, Xin MicroRNA expression profile and identification of novel microRNA biomarkers for metabolic syndrome |
title | MicroRNA expression profile and identification of novel microRNA biomarkers for metabolic syndrome |
title_full | MicroRNA expression profile and identification of novel microRNA biomarkers for metabolic syndrome |
title_fullStr | MicroRNA expression profile and identification of novel microRNA biomarkers for metabolic syndrome |
title_full_unstemmed | MicroRNA expression profile and identification of novel microRNA biomarkers for metabolic syndrome |
title_short | MicroRNA expression profile and identification of novel microRNA biomarkers for metabolic syndrome |
title_sort | microrna expression profile and identification of novel microrna biomarkers for metabolic syndrome |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8806888/ https://www.ncbi.nlm.nih.gov/pubmed/34269146 http://dx.doi.org/10.1080/21655979.2021.1952817 |
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