Cargando…

Protein phosphatase 1 regulatory subunit 3G (PPP1R3G) correlates with poor prognosis and immune infiltration in lung adenocarcinoma

The protein phosphatase 1 regulatory subunit 3 G (PPP1R3G) participates in many tumor biological processes; however, its effects on lung adenocarcinoma (LUAD) have not been clarified. Therefore, this study aimed to explore the correlation between PPP1R3G and the prognosis and immune invasion of LUAD...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhuo, Xingli, Chen, Lan, Lai, Zongwei, Liu, Jiansheng, Li, Shengjun, Hu, Ahu, Lin, Yuansheng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8806970/
https://www.ncbi.nlm.nih.gov/pubmed/34592886
http://dx.doi.org/10.1080/21655979.2021.1985817
_version_ 1784643586016411648
author Zhuo, Xingli
Chen, Lan
Lai, Zongwei
Liu, Jiansheng
Li, Shengjun
Hu, Ahu
Lin, Yuansheng
author_facet Zhuo, Xingli
Chen, Lan
Lai, Zongwei
Liu, Jiansheng
Li, Shengjun
Hu, Ahu
Lin, Yuansheng
author_sort Zhuo, Xingli
collection PubMed
description The protein phosphatase 1 regulatory subunit 3 G (PPP1R3G) participates in many tumor biological processes; however, its effects on lung adenocarcinoma (LUAD) have not been clarified. Therefore, this study aimed to explore the correlation between PPP1R3G and the prognosis and immune invasion of LUAD. We evaluated the relationship between PPP1R3G and LUAD using a wide range of databases and analysis tools, including UALCAN, TIMER, miRDB, The Human Protein Atlas and the MethSurv database. First, we explored the mRNA and protein expression levels of PPP1R3G in LUAD, and results were validated using real-time PCR. Next, we explored the relationship between PPP1R3G expression and clinical features. Finally, Kaplan-Meier curves and Cox regression were employed to investigate the prognostic significance of PPP1R3G in LUAD. In addition, we explored the relationship between the expression of PPP1R3G and immune infiltration using the TIMER database. We analyzed the relationship between PPP1R3G and methylation using MethSurv database. Results showed that PPP1R3G expression in LUAD tissues was higher than that in normal tissues, and high expression was suggestive of a poor prognosis. Moreover, PPP1R3G expression was positively correlated with the immune infiltration of CD4 + T cells, macrophages, neutrophils, and dendritic cells. PPP1R3G copy number variations also demonstrated remarkable associations with the levels of B cells, CD4 + T cells, macrophages, neutrophils, and dendritic cells. Finally, a PPP1R3G-associated regulatory network was constructed. Overall, PPP1R3G might be a poor prognostic biomarker for LUAD and is associated with tumor immune cell infiltration. Abbreviations: LUAD: Lung adenocarcinoma; PPP1R3G: The protein phosphatase 1 regulatory subunit 3G; OS: overall survival; CI: confidence interval; CNV: copy number variance; HR: Hazard Ratio; ROC: receiver operating characteristic curve; AUC: area under the curve; TCGA: The Cancer Genome Atlas
format Online
Article
Text
id pubmed-8806970
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-88069702022-02-02 Protein phosphatase 1 regulatory subunit 3G (PPP1R3G) correlates with poor prognosis and immune infiltration in lung adenocarcinoma Zhuo, Xingli Chen, Lan Lai, Zongwei Liu, Jiansheng Li, Shengjun Hu, Ahu Lin, Yuansheng Bioengineered Research Paper The protein phosphatase 1 regulatory subunit 3 G (PPP1R3G) participates in many tumor biological processes; however, its effects on lung adenocarcinoma (LUAD) have not been clarified. Therefore, this study aimed to explore the correlation between PPP1R3G and the prognosis and immune invasion of LUAD. We evaluated the relationship between PPP1R3G and LUAD using a wide range of databases and analysis tools, including UALCAN, TIMER, miRDB, The Human Protein Atlas and the MethSurv database. First, we explored the mRNA and protein expression levels of PPP1R3G in LUAD, and results were validated using real-time PCR. Next, we explored the relationship between PPP1R3G expression and clinical features. Finally, Kaplan-Meier curves and Cox regression were employed to investigate the prognostic significance of PPP1R3G in LUAD. In addition, we explored the relationship between the expression of PPP1R3G and immune infiltration using the TIMER database. We analyzed the relationship between PPP1R3G and methylation using MethSurv database. Results showed that PPP1R3G expression in LUAD tissues was higher than that in normal tissues, and high expression was suggestive of a poor prognosis. Moreover, PPP1R3G expression was positively correlated with the immune infiltration of CD4 + T cells, macrophages, neutrophils, and dendritic cells. PPP1R3G copy number variations also demonstrated remarkable associations with the levels of B cells, CD4 + T cells, macrophages, neutrophils, and dendritic cells. Finally, a PPP1R3G-associated regulatory network was constructed. Overall, PPP1R3G might be a poor prognostic biomarker for LUAD and is associated with tumor immune cell infiltration. Abbreviations: LUAD: Lung adenocarcinoma; PPP1R3G: The protein phosphatase 1 regulatory subunit 3G; OS: overall survival; CI: confidence interval; CNV: copy number variance; HR: Hazard Ratio; ROC: receiver operating characteristic curve; AUC: area under the curve; TCGA: The Cancer Genome Atlas Taylor & Francis 2021-10-21 /pmc/articles/PMC8806970/ /pubmed/34592886 http://dx.doi.org/10.1080/21655979.2021.1985817 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Paper
Zhuo, Xingli
Chen, Lan
Lai, Zongwei
Liu, Jiansheng
Li, Shengjun
Hu, Ahu
Lin, Yuansheng
Protein phosphatase 1 regulatory subunit 3G (PPP1R3G) correlates with poor prognosis and immune infiltration in lung adenocarcinoma
title Protein phosphatase 1 regulatory subunit 3G (PPP1R3G) correlates with poor prognosis and immune infiltration in lung adenocarcinoma
title_full Protein phosphatase 1 regulatory subunit 3G (PPP1R3G) correlates with poor prognosis and immune infiltration in lung adenocarcinoma
title_fullStr Protein phosphatase 1 regulatory subunit 3G (PPP1R3G) correlates with poor prognosis and immune infiltration in lung adenocarcinoma
title_full_unstemmed Protein phosphatase 1 regulatory subunit 3G (PPP1R3G) correlates with poor prognosis and immune infiltration in lung adenocarcinoma
title_short Protein phosphatase 1 regulatory subunit 3G (PPP1R3G) correlates with poor prognosis and immune infiltration in lung adenocarcinoma
title_sort protein phosphatase 1 regulatory subunit 3g (ppp1r3g) correlates with poor prognosis and immune infiltration in lung adenocarcinoma
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8806970/
https://www.ncbi.nlm.nih.gov/pubmed/34592886
http://dx.doi.org/10.1080/21655979.2021.1985817
work_keys_str_mv AT zhuoxingli proteinphosphatase1regulatorysubunit3gppp1r3gcorrelateswithpoorprognosisandimmuneinfiltrationinlungadenocarcinoma
AT chenlan proteinphosphatase1regulatorysubunit3gppp1r3gcorrelateswithpoorprognosisandimmuneinfiltrationinlungadenocarcinoma
AT laizongwei proteinphosphatase1regulatorysubunit3gppp1r3gcorrelateswithpoorprognosisandimmuneinfiltrationinlungadenocarcinoma
AT liujiansheng proteinphosphatase1regulatorysubunit3gppp1r3gcorrelateswithpoorprognosisandimmuneinfiltrationinlungadenocarcinoma
AT lishengjun proteinphosphatase1regulatorysubunit3gppp1r3gcorrelateswithpoorprognosisandimmuneinfiltrationinlungadenocarcinoma
AT huahu proteinphosphatase1regulatorysubunit3gppp1r3gcorrelateswithpoorprognosisandimmuneinfiltrationinlungadenocarcinoma
AT linyuansheng proteinphosphatase1regulatorysubunit3gppp1r3gcorrelateswithpoorprognosisandimmuneinfiltrationinlungadenocarcinoma